RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAIMQ9NVQ4 179 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 POLR3BQ9NW08 1133 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PTGFRNQ9P2B2 879 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 BCL9LQ86UU0 1499 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SLC19A2O60779 497 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ENO2P09104 434 aaPredicted RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 IMPDH1P20839 514 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ALDH7A1P49419 539 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RAB5BP61020 215 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 IL18Q14116 193 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 LARS2Q15031 903 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MON1AQ86VX9 555 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TPD52L3Q96J77 140 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CDC6Q99741 560 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 C12orf65Q9H3J6 166 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 NT5DC2Q9H857 520 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CYP4F12Q9HCS2 524 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 COQ4Q9Y3A0 265 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RASAL1O95294 804 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MMP10P09238 476 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 HSD3B1P14060 373 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 HSD3B2P26439 372 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SOX9P48436 509 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 RGS7P49802 495 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 SNRPD1P62314 119 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 UBAP2LQ14157 1087 aaKnown RBP6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PTGR1Q14914 329 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MOB2Q70IA6 237 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PHF21BQ96EK2 531 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TM9SF2Q99805 663 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PI4K2AQ9BTU6 479 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 PCDHB16Q9NRJ7 776 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 EVA1BQ9NVM1 165 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF224Q9NZL3 707 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 FLRT1Q9NZU1 646 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 IFT52Q9Y366 437 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 CCNB2O95067 398 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 KAT7O95251 611 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 MON1BQ7L1V2 547 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TCEAL4Q96EI5 215 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 ACOX2Q99424 681 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 NT5MQ9NPB1 228 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 GRHL1Q9NZI5 618 aa6.51□□□□□ -1.37
VPS13B-202ENST00000357162 TACSTD2P09758 323 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CYP3A5P20815 502 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CRATP43155 626 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RASGEF1BQ0VAM2 473 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 HLFQ16534 295 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CBWD3Q5JTY5 395 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CBWD5Q5RIA9 395 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OR5T2Q8NGG2 359 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF599Q96NL3 588 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RAB11FIP5Q9BXF6 653 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 NALCNQ8IZF0 1738 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CYB561D2O14569 222 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PLOD3O60568 738 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RLN2P04090 185 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PTGER3P43115 390 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SLC13A3Q8WWT9 602 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ELMO3Q96BJ8 720 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C7orf50Q9BRJ6 194 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 COPS4Q9BT78 406 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SDCBP2Q9H190 292 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 POPDC3Q9HBV1 291 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SFMBT1Q9UHJ3 866 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C1orf167Q5SNV9 1468 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ATP6AP2A0A1C7CYW4 349 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 NDST3O95803 873 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 MOCS2O96007 188 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 URODP06132 367 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 RHOAP61586 193 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 FADDQ13158 208 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 EFCAB12Q6NXP0 572 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ANKRD23Q86SG2 305 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 IRF2BP1Q8IU81 584 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF548Q8NEK5 533 aaPredicted RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 DENND1AQ8TEH3 1009 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SLC38A4Q969I6 547 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 REXO5Q96IC2 774 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 DUSP16Q9BY84 665 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 CHST7Q9NS84 486 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SCP2D1Q9UJQ7 156 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PHF24Q9UPV7 400 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PRRG1O14668 218 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 C2P06681 752 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OMPP47874 163 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PLA2G4EQ3MJ16 856 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 FSTL4Q6MZW2 842 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 EPGNQ6UW88 154 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ASRGL1Q7L266 308 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 UBQLNLQ8IYU4 475 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 PCSK9Q8NBP7 692 aaKnown RBP6.5□□□□□ -1.37
VPS13B-202ENST00000357162 SLC22A17Q8WUG5 538 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 OSTF1Q92882 214 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 NTAN1Q96AB6 310 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 AIF1LQ9BQI0 150 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ARL8BQ9NVJ2 186 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 A0A1W2PP18 115 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 WRBO00258 174 aa6.5□□□□□ -1.37
VPS13B-202ENST00000357162 ITM2AO43736 263 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms