RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PRKD1Q15139 912 aaPredicted RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 TEAD4Q15561 434 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 RNASE12Q5GAN4 147 aaKnown RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.7□□□□□ -0.067e-7■■■■■ 46.1
CHD4-201ENST00000357008 USP43Q70EL4 1123 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SPPL2BQ8TCT7 592 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 OR4F21O95013 312 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 S100GP29377 79 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SPAM1P38567 509 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 TUSC3Q13454 348 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 OR5K1Q8NHB7 308 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SPATA22Q8NHS9 363 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 KBTBD7Q8WVZ9 684 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 NECTIN3Q9NQS3 549 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 DMAC2Q9NW81 257 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CKLFQ9UBR5 152 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 MCIDASD6RGH6 385 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 CERKQ8TCT0 537 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 KCNN2Q9H2S1 579 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 SLC15A5A6NIM6 579 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 RPL26P61254 145 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 DSC2Q02487 901 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 FAM46CQ5VWP2 391 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ARMCX6Q7L4S7 300 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 LIX1Q8N485 282 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ZNF433Q8N7K0 673 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 DNAJB8Q8NHS0 232 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 IPCEF1Q8WWN9 437 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 EMID1Q96A84 441 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 COPS4Q9BT78 406 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 TAS2R7Q9NYW3 318 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 IGSF9Q9P2J2 1179 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ZNF214Q9UL59 606 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 BAIAP2Q9UQB8 552 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 MAP4K5Q9Y4K4 846 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 REM1O75628 298 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 CCNDBP1O95273 360 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 TOP3BO95985 862 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 ASGR1P07306 291 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ARHGDIBP52566 201 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 GDF10P55107 478 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 CDH12P55289 794 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 SULT2A1Q06520 285 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ASTE1Q2TB18 679 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 BEND7Q8N7W2 519 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 DQX1Q8TE96 717 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 SLCO2A1Q92959 643 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 NSMCE3Q96MG7 304 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 MNTQ99583 582 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 YTHDF1Q9BYJ9 559 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 MRPS33Q9Y291 106 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 SLC7A4O43246 635 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ATG13O75143 517 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 SAGP10523 405 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 CDH4P55283 916 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 LARS2Q15031 903 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 SWI5Q1ZZU3 235 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 CRYBG2Q8N1P7 616 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 DCBLD1Q8N8Z6 715 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 MCCC1Q96RQ3 725 aaPredicted RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 CORO1BQ9BR76 489 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 FZD1Q9UP38 647 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 H3BM21 787 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 SCN2BO60939 215 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 ZNF132P52740 706 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 TARBP2Q15633 366 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 TRMT10BQ6PF06 316 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 PACRGLQ8N7B6 248 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 OR6K2Q8NGY2 324 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 TUBGCP5Q96RT8 1024 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 CNPPD1Q9BV87 410 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 NIFKQ9BYG3 293 aaKnown RBP14.69□□□□□ -0.06
CHD4-201ENST00000357008 TMEM27Q9HBJ8 222 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 SIX2Q9NPC8 291 aa14.69□□□□□ -0.06
CHD4-201ENST00000357008 NOS1APO75052 506 aaPredicted RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 PGLSO95336 258 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 CD52P31358 61 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 CCR10P46092 362 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 SLC13A3Q8WWT9 602 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 MTFR1LQ9H019 292 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 EBF2Q9HAK2 575 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 SMIM35A0A1B0GVV1 85 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 MAGEB17A8MXT2 336 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 SLC22A1O15245 554 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 MAGEB3O15480 346 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 UNGP13051 313 aaPredicted RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 LAMP2P13473 410 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 ARL2P36404 184 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 PBX3P40426 434 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 RAB2AP61019 212 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 MPPE1Q53F39 396 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 USP30Q70CQ3 517 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 NDRG1Q92597 394 aaKnown RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.68□□□□□ -0.06
CHD4-201ENST00000357008 hCG_2039718K7EN88 272 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 HTR1BP28222 390 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 TAS2R39P59534 338 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 TAF10Q12962 218 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 PCDH19Q8TAB3 1148 aa14.68□□□□□ -0.06
CHD4-201ENST00000357008 ASB9Q96DX5 294 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms