RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 C3orf80F5H4A9 247 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 INMTO95050 263 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 PDGFBP01127 241 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 APOEP02649 317 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 APEHP13798 732 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 STK19P49842 368 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 CRYBB1P53674 252 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 DPYSL2Q16555 572 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ZNF528Q3MIS6 628 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 C9orf57Q5W0N0 161 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 DEFB128Q7Z7B8 93 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 FAM114A1Q8IWE2 563 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 LINC00471Q8N535 108 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MRPL43Q8N983 215 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 SLC7A3Q8WY07 619 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 NCSTNQ92542 709 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 BIRC7Q96CA5 298 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 BIRC8Q96P09 236 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TKTL2Q9H0I9 626 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 AP5M1Q9H0R1 490 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 COQ3Q9NZJ6 369 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CD300AQ9UGN4 299 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 BZW2Q9Y6E2 419 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 K7EPI3 171 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MAGEB4O15481 346 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 HUS1O60921 280 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MYL3P08590 195 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ATXN1LP0C7T5 689 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 FUT1P19526 365 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 RPL13P26373 211 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 EPHA5P54756 1037 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TMEM215Q68D42 235 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 RBM45Q8IUH3 476 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 B4GALNT2Q8NHY0 566 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 HDAC10Q969S8 669 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TP53INP1Q96A56 240 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ORAI1Q96D31 301 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 RIPOR3Q96MK2 946 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 PHF7Q9BWX1 381 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 BEX2Q9BXY8 128 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 MAGEF1Q9HAY2 307 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 DDIT4Q9NX09 232 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TXNDC9O14530 226 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ADAM11O75078 769 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 BCAS1O75363 584 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 JRKO75564 520 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 SUN1O94901 812 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 FHP07954 510 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 AOC1P19801 751 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 HOXD9P28356 352 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 SMSP52788 366 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 STRN3Q13033 797 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TSNQ15631 228 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 USP39Q53GS9 565 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 DMRTC1Q5HYR2 192 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 SFRP4Q6FHJ7 346 aaPredicted RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 LARP4Q71RC2 724 aaKnown RBP eCLIP5.56□□□□□ -1.52
CD47-201ENST00000355354 TRMT10CQ7L0Y3 403 aaKnown RBP5.56□□□□□ -1.52
CD47-201ENST00000355354 CCDC103Q8IW40 242 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 SCUBE1Q8IWY4 988 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 UBE2J2Q8N2K1 259 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 IPMKQ8NFU5 416 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 NELL2Q99435 816 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 POMKQ9H5K3 350 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ALG9Q9H6U8 611 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 AKTIPQ9H8T0 292 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 OR12D3Q9UGF7 316 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 ZNF232Q9UNY5 417 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 TRPV2Q9Y5S1 764 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 AP4B1Q9Y6B7 739 aa5.56□□□□□ -1.52
CD47-201ENST00000355354 CENPVL1A0A0U1RR11 272 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PRAMEF27A3QJZ7 478 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TMEM221A6NGB7 291 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 A8MT66 165 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 M0R296 226 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PODXLO00592 558 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PRKRAO75569 313 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 IPO13O94829 963 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 ALPPL2P10696 532 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TBXA2RP21731 343 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 AQP1P29972 269 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MAGEA12P43365 314 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 MLLT6P55198 1093 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 SLC34A1Q06495 639 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 APOFQ13790 326 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PGS1Q32NB8 556 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 CFAP157Q5JU67 520 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 EPGNQ6UW88 154 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 TDRPQ86YL5 185 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 NUDCD3Q8IVD9 361 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 C2orf73Q8N5S3 287 aaPredicted RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 ARL10Q8N8L6 244 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 PDCD6IPQ8WUM4 868 aaKnown RBP5.55□□□□□ -1.52
CD47-201ENST00000355354 RTP4Q96DX8 246 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 DNAJA3Q96EY1 480 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 APOPT1Q96IL0 206 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 UBXN10Q96LJ8 280 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 DMRTA2Q96SC8 542 aa5.55□□□□□ -1.52
CD47-201ENST00000355354 SEPHS2Q99611 448 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms