RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 CBSP35520 551 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 PRLHRP49683 370 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 RGS4P49798 205 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 CTSCP53634 463 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 PRKAA2P54646 552 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 BST1Q10588 318 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 GBX1Q14549 363 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 OR4D1Q15615 310 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 ZNF648Q5T619 568 aaPredicted RBP9.46□□□□□ -0.89
NPHP1-202ENST00000355301 LIPMQ5VYY2 423 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 CES4AQ5XG92 561 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 FAM124AQ86V42 546 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 TRIM69Q86WT6 500 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 HEATR4Q86WZ0 1026 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 OR2T34Q8NGX1 318 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 STAG3L4Q8TBR4 150 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.89
NPHP1-202ENST00000355301 CLDN23Q96B33 292 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 CCDC126Q96EE4 140 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 ZNF514Q96K75 400 aaPredicted RBP9.46□□□□□ -0.89
NPHP1-202ENST00000355301 LENG8Q96PV6 779 aaPredicted RBP9.46□□□□□ -0.89
NPHP1-202ENST00000355301 ATOH8Q96SQ7 321 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 C1QTNF7Q9BXJ2 289 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 TEX101Q9BY14 249 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 PITPNM3Q9BZ71 974 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 TBC1D17Q9HA65 648 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 MBNL1Q9NR56 388 aaKnown RBP9.46□□□□□ -0.89
NPHP1-202ENST00000355301 FGFR1OP2Q9NVK5 253 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 C2orf42Q9NWW7 574 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 NUMA1Q14980 2115 aa9.46□□□□□ -0.89
NPHP1-202ENST00000355301 LRRC72A6NJI9 287 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 OR2AG2A6NM03 316 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 BTN3A1O00481 513 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 NDUFAB1O14561 156 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 SNNO75324 88 aaPredicted RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 H2AFYO75367 372 aaKnown RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 SERPINE1P05121 402 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 PCCBP05166 539 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ENO3P13929 434 aaPredicted RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 PPP2CBP62714 309 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 PPP2CAP67775 309 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 CDK3Q00526 305 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 INPP5AQ14642 412 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 IRF4Q15306 451 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 TSNQ15631 228 aaKnown RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 BCL7AQ4VC05 210 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ACSBG2Q5FVE4 666 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 PLEKHS1Q5SXH7 462 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ANO7Q6IWH7 933 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ZCCHC23Q6ZST2 131 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 FAM47EQ6ZV65 393 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ADGRG6Q86SQ4 1221 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 TRIM74Q86UV6 250 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 TSTD1Q8NFU3 115 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 PJA1Q8NG27 643 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 FUBP1Q96AE4 644 aaKnown RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ASB2Q96Q27 587 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 DOCK9Q9BZ29 2069 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 FAM107BQ9H098 131 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 NSRP1Q9H0G5 558 aaKnown RBP9.46□□□□□ -0.9
NPHP1-202ENST00000355301 OR2AG1Q9H205 316 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 CHRDQ9H2X0 955 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 RABEP2Q9H5N1 569 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 ATXN10Q9UBB4 475 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 IKZF3Q9UKT9 509 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 GPR34Q9UPC5 381 aa9.46□□□□□ -0.9
NPHP1-202ENST00000355301 SYCE1LA8MT33 242 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 A8MT66 165 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 GPR89AB7ZAQ6 455 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 CDC7O00311 574 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 LILRB5O75023 590 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 GPC4O75487 556 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 IPO13O94829 963 aaKnown RBP9.45□□□□□ -0.9
NPHP1-202ENST00000355301 GPR89BP0CG08 455 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 MTHFD2P13995 350 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 RPS9P46781 194 aaKnown RBP9.45□□□□□ -0.9
NPHP1-202ENST00000355301 DNAJB13P59910 316 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 NFKB2Q00653 900 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 OCRLQ01968 901 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 ASPHQ12797 758 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 STX3Q13277 289 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 TMEM220Q6QAJ8 160 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 PIWIL4Q7Z3Z4 852 aaKnown RBP9.45□□□□□ -0.9
NPHP1-202ENST00000355301 ADAMTSL2Q86TH1 951 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 SLC22A9Q8IVM8 553 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 GJD3Q8N144 294 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 MYO1HQ8N1T3 1032 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 SPEM1Q8N4L4 309 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 BEND7Q8N7W2 519 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-202ENST00000355301 PPP1R14CQ8TAE6 165 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 ASZ1Q8WWH4 475 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 KLK6Q92876 244 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 GRAMD1AQ96CP6 724 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 LINC00615Q96LM1 132 aaPredicted RBP9.45□□□□□ -0.9
NPHP1-202ENST00000355301 C7orf26Q96N11 449 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 CCM2Q9BSQ5 444 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 LGR4Q9BXB1 951 aa9.45□□□□□ -0.9
NPHP1-202ENST00000355301 FAM126AQ9BYI3 521 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms