RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 RHDQ02161 417 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 LSAMPQ13449 338 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MADCAM1Q13477 382 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 GRB14Q14449 540 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SPATS1Q496A3 300 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PITRM1Q5JRX3 1037 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 HJURPQ8NCD3 748 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 DCAKDQ8WVC6 231 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC13A3Q8WWT9 602 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 IL1RAPQ9NPH3 570 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MFSD11O43934 449 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PAX3P23760 479 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ATP5C1P36542 298 aaKnown RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAPK9P45984 424 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 GBE1Q04446 702 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 FUT2Q10981 343 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PCBP1Q15365 356 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ALG11Q2TAA5 492 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 UBE2R2Q712K3 238 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ERMP1Q7Z2K6 904 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MND1Q9BWT6 205 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ATRNO75882 1429 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 A0A1W2PPW3 197 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 LRRC14BA6NHZ5 514 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 H7C2Y5 167 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PDCD5O14737 125 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 KERAO60938 352 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAFO75444 373 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 BCAS2O75934 225 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCNCP24863 283 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 S100A2P29034 98 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TNFSF9P41273 254 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 IDNKQ5T6J7 187 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 LCLAT1Q6UWP7 414 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 LRRC52Q8N7C0 313 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SEC14L1Q92503 715 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 IPPKQ9H8X2 491 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 A8MX80 341 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ARPC2O15144 300 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF45Q02386 682 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PPP1R26Q5T8A7 1209 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 DCLRE1AQ6PJP8 1040 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SMIM5Q71RC9 77 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CLIP4Q8N3C7 705 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 FEM1CQ96JP0 617 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TBATAQ96M53 351 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CPXM1Q96SM3 734 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 GAD1Q99259 594 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 COPS8Q99627 209 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 AARSD1Q9BTE6 412 aaKnown RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRIM2Q9C040 744 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CST11Q9H112 138 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TBC1D17Q9HA65 648 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 ELL3Q9HB65 397 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 POLR3BQ9NW08 1133 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAT2BQ9NZL9 334 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SPATA7Q9P0W8 599 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TESMINQ9Y4I5 508 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCL15-CCL14A0A0B4J2E2 113 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SCGNO76038 276 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 STOMP27105 288 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 YAP1P46937 504 aaKnown RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCL15Q16663 113 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 GARNL3Q5VVW2 1013 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 RNF180Q86T96 592 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 PLCZ1Q86YW0 608 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 TRAPPC12Q8WVT3 735 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 CEP295NLQ96MC4 621 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 KCTD15Q96SI1 283 aaPredicted RBP12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM129BQ96TA1 746 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SLC30A2Q9BRI3 323 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 DUSP16Q9BY84 665 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 DPAGT1Q9H3H5 408 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SGK2Q9HBY8 427 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 SPON1Q9HCB6 807 aa12.58□□□□□ -0.4
SYNCRIP-201ENST00000355238 RIIAD1A6NNX1 92 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 YDJCA8MPS7 323 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 MAGEB3O15480 346 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNAJB5O75953 348 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SERPINA3P01011 423 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CSTF1Q05048 431 aaKnown RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 RAPSNQ13702 412 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CEP76Q8TAP6 659 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 STYXQ8WUJ0 223 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 DNAJB3Q8WWF6 145 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZNF780BQ9Y6R6 833 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 URADA6NGE7 173 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 OR2AT4A6NND4 320 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 STK16O75716 305 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 HTR7P34969 479 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SGCGQ13326 291 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 FAM83AQ86UY5 434 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 SNX33Q8WV41 574 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 CCDC107Q8WV48 283 aa12.57□□□□□ -0.4
SYNCRIP-201ENST00000355238 GTPBP3Q969Y2 492 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms