RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 NME4O00746 187 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 SUPT7LO94864 414 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 BMP10O95393 424 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 PAMP19021 973 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 ACADVLP49748 655 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 GEMP55040 296 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 NME5P56597 212 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 PLOD1Q02809 727 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-204ENST00000353317 GALNT1Q10472 559 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-204ENST00000353317 CDH18Q13634 790 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 LY6G5CQ5SRR4 150 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 TMEM207Q6UWW9 146 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 HACD2Q6Y1H2 254 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 AFAP1L2Q8N4X5 818 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 NAT16Q8N8M0 369 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 LZICQ8WZA0 190 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 SAMD11Q96NU1 681 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 BIRC8Q96P09 236 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 TRIB3Q96RU7 358 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 TCF12Q99081 682 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 GPATCH1Q9BRR8 931 aaKnown RBP8.51□□□□□ -1.05
TRIM55-204ENST00000353317 IL1RL2Q9HB29 575 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 ARNT2Q9HBZ2 717 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 CCM2LQ9NUG4 571 aaPredicted RBP8.51□□□□□ -1.05
TRIM55-204ENST00000353317 ABCB8Q9NUT2 735 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 EGFL7Q9UHF1 273 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 LSM7Q9UK45 103 aaKnown RBP8.51□□□□□ -1.05
TRIM55-204ENST00000353317 AURKCQ9UQB9 309 aa8.51□□□□□ -1.05
TRIM55-204ENST00000353317 NEDD8-MDP1E9PL57 170 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 XYLBO75191 536 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PAPLNO95428 1278 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SLC34A2O95436 690 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 IMPDH1P20839 514 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 GPX3P22352 226 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 LEPRP48357 1165 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CDH13P55290 713 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF235Q14590 738 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ACAP2Q15057 778 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 UGT3A2Q3SY77 523 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FUT11Q495W5 492 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FAM78AQ5JUQ0 283 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PDE12Q6L8Q7 609 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 DHRS4L2Q6PKH6 230 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 KIAA0408Q6ZU52 694 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 RTL10Q7L3V2 364 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 LDB1Q86U70 411 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SPPL2CQ8IUH8 684 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CLVS1Q8IUQ0 354 aaPredicted RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 NPAS3Q8IXF0 933 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF786Q8N393 782 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FIBINQ8TAL6 211 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ISOC1Q96CN7 298 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 C19orf60Q96EN9 201 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 POLR1EQ9GZS1 481 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ALG9Q9H6U8 611 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CHCHD3Q9NX63 227 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 GIMAP2Q9UG22 337 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CDC14AQ9UNH5 594 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PTGDR2Q9Y5Y4 395 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TCF20Q9UGU0 1960 aaKnown RBP8.5□□□□□ -1.05
TRIM55-204ENST00000353317 A0A0J9YYE9 177 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 C9JVG2 144 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TMX2-CTNND1H3BSU7 103 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 PPP6CO00743 305 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TPST1O60507 370 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 CLIC3O95833 236 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 RBP1P09455 135 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ENTPD1P49961 510 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ARSDP51689 593 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SH3BP2P78314 561 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SLC14A2Q15849 920 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 MAP7D1Q3KQU3 841 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 VPS26BQ4G0F5 336 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 MPPE1Q53F39 396 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 DGKKQ5KSL6 1271 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TBCELQ5QJ74 424 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF678Q5SXM1 525 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 HECTD2Q5U5R9 776 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 IRAK1BP1Q5VVH5 260 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ELMSAN1Q6PJG2 1045 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ISCA2Q86U28 154 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 C12orf40Q86WS4 652 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SFTPA1Q8IWL2 248 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 MFSD2AQ8NA29 543 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FNDC8Q8TC99 324 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SORCS1Q8WY21 1168 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FGF13Q92913 245 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ROPN1LQ96C74 230 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 FAM210AQ96ND0 272 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ZNF599Q96NL3 588 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TM6SF2Q9BZW4 377 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 RETREG1Q9H6L5 497 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 ABCD2Q9UBJ2 740 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 MSRAQ9UJ68 235 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 SPO11Q9Y5K1 396 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 DNAJC15Q9Y5T4 150 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 DHRS12A0PJE2 317 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 OR51F1A6NGY5 319 aa8.5□□□□□ -1.05
TRIM55-204ENST00000353317 TRIM64CA6NLI5 447 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms