RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DENND5AQ6IQ26 1287 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 NPWQ8N729 165 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 BPIFB1Q8TDL5 484 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 UBASH3BQ8TF42 649 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 BTN2A3PQ96KV6 586 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 AMBNQ9NP70 447 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 RCOR3Q9P2K3 495 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DNAJB9Q9UBS3 223 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 UTS2RQ9UKP6 389 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 EIF3LQ9Y262 564 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 GMPPBQ9Y5P6 360 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ARID2Q68CP9 1835 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 AGAP5A6NIR3 686 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 FAM25AB3EWG3 89 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 FAM25CB3EWG5 89 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 FAM25GB3EWG6 89 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 LOC110117498-PIK3R3F6TDL0 507 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 AP3D1O14617 1153 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PPEF2O14830 753 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PRKD3O94806 890 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CYP11A1P05108 521 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 MYCLP1P12525 358 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DDX5P17844 614 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 HTR2BP41595 481 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 NDUFV1P49821 464 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CYP4F2P78329 520 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 FOXM1Q08050 763 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ACOX1Q15067 660 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SLC10A6Q3KNW5 377 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CYHR1Q6ZMK1 362 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 LACC1Q8IV20 430 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TTC39CQ8N584 583 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PARP16Q8N5Y8 322 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TEKT5Q96M29 485 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ACOX2Q99424 681 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ROGDIQ9GZN7 287 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SLIRPQ9GZT3 109 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SDR39U1Q9NRG7 319 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PIGVQ9NUD9 493 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DDIT4Q9NX09 232 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ERVK13-1Q9NX77 482 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TSR3Q9UJK0 312 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 AAR2Q9Y312 384 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 KIAA1217Q5T5P2 1943 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 MEN1O00255 615 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ARHGEF9O43307 516 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DNAJB5O75953 348 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TXNP10599 105 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PCMT1P22061 227 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 IGFBP5P24593 272 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 AZGP1P25311 298 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ARNTP27540 789 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 HTR1EP28566 365 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DGKQP52824 942 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ISL1P61371 349 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 HERVK_113P63132 956 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 GHRHRQ02643 423 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SELPLGQ14242 412 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PAFAH1B3Q15102 231 aaKnown RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CDK10Q15131 360 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 TYSND1Q2T9J0 566 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SDE2Q6IQ49 451 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 DET1Q7L5Y6 550 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ADHFE1Q8IWW8 467 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SPERTQ8NA61 448 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SETD9Q8NE22 299 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 OR2T12Q8NG77 320 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 OR10A6Q8NH74 314 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 NUDT8Q8WV74 236 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 JPH3Q8WXH2 748 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SEPT1Q8WYJ6 367 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 CENPIQ92674 756 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ESAMQ96AP7 390 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 MYOCQ99972 504 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 KCNS3Q9BQ31 491 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 ERVK-6Q9BXR3 956 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 MMP27Q9H306 513 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 KIF17Q9P2E2 1029 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 PCDHGA10Q9Y5H3 936 aa7.55□□□□□ -1.2
BRCA1-201ENST00000352993 SLX4Q8IY92 1834 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 C12orf71A8MTZ7 269 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 NDST3O95803 873 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 UBA1P22314 1058 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SLC26A3P40879 764 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 SERPINH1P50454 418 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 ARHGDIAP52565 204 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 P2RX3P56373 397 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CD83Q01151 205 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 INCA1Q0VD86 236 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 MADCAM1Q13477 382 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 TAB1Q15750 504 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CRY1Q16526 586 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 PLEKHG6Q3KR16 790 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CELF3Q5SZQ8 465 aaKnown RBP7.54□□□□□ -1.2
BRCA1-201ENST00000352993 KCTD11Q693B1 232 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 CYP20A1Q6UW02 462 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 LYPD8Q6UX82 237 aa7.54□□□□□ -1.2
BRCA1-201ENST00000352993 EFL1Q7Z2Z2 1120 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms