RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 EPHA3P29320 983 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ANGPT1Q15389 498 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 KLHL35Q6PF15 583 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 CYP20A1Q6UW02 462 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF554Q86TJ5 538 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 CAMK1DQ8IU85 385 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF317Q96PQ6 595 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 C9orf16Q9BUW7 83 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 TYROBPO43914 113 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 MGRN1O60291 552 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 DLDP09622 509 aaKnown RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 PRPS2P11908 318 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 XIAPP98170 497 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 GTF2H2Q13888 395 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 MAPKAPK3Q16644 382 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ATAD3BQ5T9A4 648 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 GTF2H2CQ6P1K8 395 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 BHLHB9Q6PI77 547 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ARHGAP36Q6ZRI8 547 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 GRASPQ7Z6J2 395 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 C17orf64Q86WR6 236 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 PROSER1Q86XN7 944 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 PLD3Q8IV08 490 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 SPATA6LQ8N4H0 392 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 VPS50Q96JG6 964 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ZIC5Q96T25 663 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 AIF1LQ9BQI0 150 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 KLHL31Q9H511 634 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 CAAP1Q9H8G2 361 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 COLEC10Q9Y6Z7 277 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 MYO1GB0I1T2 1018 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 KPNA4O00629 521 aaPredicted RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 TGM5O43548 720 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 NTSP30990 170 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 FOXN2P32314 431 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 NRLP54845 237 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
SMAD9-201ENST00000350148 CAPSLQ8WWF8 208 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 KCNJ9Q92806 393 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 PRKAG3Q9UGI9 489 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
SMAD9-201ENST00000350148 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 LDLRP01130 860 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PRLP01236 227 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RRM2P31350 389 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 GNA13Q14344 377 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ZSCAN18Q8TBC5 510 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 C10orf82Q8WW14 230 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 NUS1Q96E22 293 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 KLF16Q9BXK1 252 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 MBD2Q9UBB5 411 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TMCC3Q9ULS5 477 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 STX16-NPEPL1H3BU86 382 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 STX16O14662 325 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 NRP2O60462 931 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 UGT1A9O60656 530 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TM7SF2O76062 418 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 MFN2O95140 757 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 IL4RP24394 825 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PTDSS1P48651 473 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CLCN4P51793 760 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 USP46P62068 366 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 CBX3Q13185 183 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 THOC7Q6I9Y2 204 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 GLB1L3Q8NCI6 653 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SRFBP1Q8NEF9 429 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ROPN1LQ96C74 230 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 RPL10LQ96L21 214 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TRIT1Q9H3H1 467 aaKnown RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 UGT1A7Q9HAW7 530 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 UGT1A10Q9HAW8 530 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 UGT1A8Q9HAW9 530 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 MTMR10Q9NXD2 777 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 PADI4Q9UM07 663 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SLC12A4Q9UP95 1085 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ENTPD4Q9Y227 616 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3DA0A087WVF3 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3IA0A087WXS9 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3EA0A087X179 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3KA0A087X1G2 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3FA6NER0 549 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 MEI4A8MW99 385 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3LB9A6J9 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3HP0C7X1 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 ATP6V1B1P15313 513 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TLX1P31314 330 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 SLC7A9P82251 487 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 C16orf72Q14CZ0 275 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3GQ6DHY5 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3CQ6IPX1 549 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 LRRC70Q7Z2Q7 622 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 LYSMD3Q7Z3D4 306 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 BBS7Q8IWZ6 715 aa12.01□□□□□ -0.49
SMAD9-201ENST00000350148 TBC1D3Q8IZP1 549 aaPredicted RBP12.01□□□□□ -0.49
SMAD9-201ENST00000350148 HERPUD2Q9BSE4 406 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms