RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 RCAN2Q14206 197 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC14A2Q15849 920 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 NFE2Q16621 373 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 PLEKHG6Q3KR16 790 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DALRD3Q5D0E6 543 aaKnown RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 ZNF678Q5SXM1 525 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 FAAH2Q6GMR7 532 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 GLYATQ6IB77 296 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SULT1C3Q6IMI6 304 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 GALNT12Q8IXK2 581 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 NETO2Q8NC67 525 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SLC16A10Q8TF71 515 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 C18orf25Q96B23 403 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 RMDN1Q96DB5 314 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 ZHX1-C8orf76Q96EF9 292 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 GDF15Q99988 308 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 TBL1YQ9BQ87 522 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 TMEM246Q9BRR3 403 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DUSP21Q9H596 190 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 SMURF2Q9HAU4 748 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CDHR5Q9HBB8 845 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 ENTPD7Q9NQZ7 604 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DNAJB9Q9UBS3 223 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 LEF1Q9UJU2 399 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 C3orf18Q9UK00 162 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 CAB39Q9Y376 341 aaPredicted RBP10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 GRIP1Q9Y3R0 1128 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 GPSM3Q9Y4H4 160 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 DNAJC15Q9Y5T4 150 aa10.21□□□□□ -0.77
CHRNA1-202ENST00000348749 A0A0G2JLL6 359 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM25AB3EWG3 89 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM25CB3EWG5 89 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 FAM25GB3EWG6 89 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 VPS4BO75351 444 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 USP2O75604 605 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 PRKD3O94806 890 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 APOA1P02647 267 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 CPB1P15086 417 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 PRKACBP22694 351 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 LMO2P25791 158 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 HOXA11P31270 313 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 RRM2P31350 389 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 BRCA1P38398 1863 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC1A2P43004 574 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 CLCN5P51795 746 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 COL4A4P53420 1690 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 GEMP55040 296 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 KCNK10P57789 538 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 OR2B6P58173 313 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 OR4D2P58180 307 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 CXCR4P61073 352 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 SLC35A2P78381 396 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 CHRNB3Q05901 458 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 TRAF3Q13114 568 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 GRB7Q14451 532 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 RFX4Q33E94 735 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 ZC3H12BQ5HYM0 836 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 PRR23BQ6ZRT6 265 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 PRRT2Q7Z6L0 340 aaPredicted RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 CELF2-AS1Q8N7Q2 184 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 COPS5Q92905 334 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 ISG20Q96AZ6 181 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 PHF21BQ96EK2 531 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 LRRC3Q9BY71 257 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 IRF2BPLQ9H1B7 796 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 LTB4R2Q9NPC1 389 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 DDX28Q9NUL7 540 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 FBXL12Q9NXK8 326 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 STMN3Q9NZ72 180 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 ERVK-18Q9QC07 812 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 WBP11Q9Y2W2 641 aaKnown RBP10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 TPRKBQ9Y3C4 175 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 GPR45Q9Y5Y3 372 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 V9GYQ6 96 aa10.21□□□□□ -0.78
CHRNA1-202ENST00000348749 DICER1Q9UPY3 1922 aaKnown RBP10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 GRXCR2A6NFK2 248 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 RRN3P2A6NIE6 340 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ZSCAN5BA6NJL1 495 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ZBBXA8MT70 800 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 EFCAB9A8MZ26 197 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 CXCL11O14625 94 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TEX28O15482 410 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 SNX2O60749 519 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ANGPTL1O95841 491 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ANXA6P08133 673 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TRAPPC2P0DI81 140 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TRAPPC2BP0DI82 140 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ITGAMP11215 1152 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ARNTP27540 789 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 GGT5P36269 586 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 NUDT1P36639 197 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 TGFBR2P37173 567 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 ZFP36L2P47974 494 aaKnown RBP10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 MASP1P48740 699 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 PLK1P53350 603 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 DAOAP59103 153 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 FPGSQ05932 587 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 FCHO2Q0JRZ9 810 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 VGLL4Q14135 290 aa10.2□□□□□ -0.78
CHRNA1-202ENST00000348749 POU6F1Q14863 301 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms