RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ZSCAN32Q9NX65 697 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 ACOT9Q9Y305 439 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 SP9P0CG40 484 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 ZNF37AP17032 561 aaPredicted RBP26.65■■□□□ 1.86
SSBP4-202ENST00000348495 ITGB6P18564 788 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 RACK1P63244 317 aaKnown RBP26.65■■□□□ 1.86
SSBP4-202ENST00000348495 ZNF658BQ4V348 819 aaPredicted RBP26.65■■□□□ 1.86
SSBP4-202ENST00000348495 TAF1BQ53T94 588 aaPredicted RBP26.65■■□□□ 1.86
SSBP4-202ENST00000348495 PMS2CLQ68D20 193 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 PAQR3Q6TCH7 311 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 TRAPPC5Q8IUR0 188 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 SLC22A18ASQ8N1D0 253 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 ZBTB44Q8NCP5 570 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 TSSK1BQ9BXA7 367 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 C1QTNF1Q9BXJ1 281 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 VPS11Q9H270 941 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 FGF22Q9HCT0 170 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 MKS1Q9NXB0 559 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 TRMT6Q9UJA5 497 aaKnown RBP26.65■■□□□ 1.86
SSBP4-202ENST00000348495 TLK1Q9UKI8 766 aa26.65■■□□□ 1.86
SSBP4-202ENST00000348495 A0A087X1B8 175 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 TYROBPO43914 113 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 MAGEC1O60732 1142 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 BRAFP15056 766 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 KELP23276 732 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 AOAHP28039 575 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 CCR7P32248 378 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 SLC26A3P40879 764 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 IRF9Q00978 393 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 CENPLQ8N0S6 344 aaPredicted RBP26.64■■□□□ 1.85
SSBP4-202ENST00000348495 INPP5DQ92835 1189 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 WDR92Q96MX6 357 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 CCM2Q9BSQ5 444 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 GULP1Q9UBP9 304 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 ANKRD6Q9Y2G4 727 aa26.64■■□□□ 1.85
SSBP4-202ENST00000348495 A0A1W2PR77 199 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 PRR33A8MZF0 331 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 CNR2P34972 360 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 WDR45BQ5MNZ6 344 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 PLD6Q8N2A8 252 aaKnown RBP26.63■■□□□ 1.85
SSBP4-202ENST00000348495 MFSD2AQ8NA29 543 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 OR56A4Q8NGH8 313 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 ANKRD49Q8WVL7 239 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 APOPT1Q96IL0 206 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 SARS2Q9NP81 518 aaKnown RBP26.63■■□□□ 1.85
SSBP4-202ENST00000348495 AASDHPPTQ9NRN7 309 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 THADAQ6YHU6 1953 aa26.63■■□□□ 1.85
SSBP4-202ENST00000348495 TNFRSF10CO14798 259 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 GRID2O43424 1007 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 WNT1P04628 370 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 HTR1BP28222 390 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 THOP1P52888 689 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 PLK5Q496M5 336 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 CRTC3Q6UUV7 619 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 CDHR3Q6ZTQ4 885 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 ARMCX6Q7L4S7 300 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 OTOAQ7RTW8 1153 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 LRRTM4Q86VH4 590 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 IQCHQ86VS3 1027 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 ZBTB2Q8N680 514 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 SLC13A1Q9BZW2 595 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 SYTL2Q9HCH5 934 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 TM9SF3Q9HD45 589 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 TSPAN12O95859 305 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 TOP3BO95985 862 aaKnown RBP26.62■■□□□ 1.85
SSBP4-202ENST00000348495 GSTM1P09488 218 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 THEGLP0DJG4 465 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 COL6A2P12110 1019 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 CRHR1P34998 444 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 GSTM4Q03013 218 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 DLG1Q12959 904 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 GBX1Q14549 363 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 KLHDC7BQ96G42 594 aa26.62■■□□□ 1.85
SSBP4-202ENST00000348495 ZC3H10Q96K80 434 aaKnown RBP26.62■■□□□ 1.85
SSBP4-202ENST00000348495 DNMT3AQ9Y6K1 912 aaPredicted RBP26.62■■□□□ 1.85
SSBP4-202ENST00000348495 GON4LQ3T8J9 2241 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 SPAG7O75391 227 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 POP7O75817 140 aaKnown RBP26.61■■□□□ 1.85
SSBP4-202ENST00000348495 CD38P28907 300 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 OVGP1Q12889 678 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 PYCR3Q53H96 274 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 ENPP7Q6UWV6 458 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 XKR5Q6UX68 686 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 LCA5Q86VQ0 697 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 CPNE9Q8IYJ1 553 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 OXR1Q8N573 874 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 OR1E3Q8WZA6 343 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 MIR1-1HGQ9H1L0 117 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 MRPL40Q9NQ50 206 aaKnown RBP26.61■■□□□ 1.85
SSBP4-202ENST00000348495 IGSF5Q9NSI5 407 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 PNMA8BQ9ULN7 279 aaPredicted RBP26.61■■□□□ 1.85
SSBP4-202ENST00000348495 SUFUQ9UMX1 484 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 PRKAB1Q9Y478 270 aa26.61■■□□□ 1.85
SSBP4-202ENST00000348495 C17orf113A0A1B0GUU1 675 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 PRSS38A1L453 326 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 COPEO14579 308 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 KPNA5O15131 536 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 PRPF4O43172 522 aaKnown RBP eCLIP26.6■■□□□ 1.852e-6■■■■□ 21.7
SSBP4-202ENST00000348495 CCDC166P0CW27 439 aa26.6■■□□□ 1.85
SSBP4-202ENST00000348495 NUBP1P53384 320 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms