RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 IL18R1Q13478 541 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 CCDC54Q8NEL0 328 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 ZCCHC10Q8TBK6 192 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 ERVK-11Q9UQG0 969 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 PCDHAC2Q9Y5I4 1007 aa22.88■■□□□ 1.25
NPAS3-201ENST00000346562 PWWP2AQ96N64 755 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 COMMD4Q9H0A8 199 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 ELOVL7A1L3X0 281 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 LOC110117498-PIK3R3F6TDL0 507 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 KMOO15229 486 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 AHCYL1O43865 530 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 DHFRP00374 187 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 GSTT1P30711 240 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 FOXM1Q08050 763 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 IL17AQ16552 155 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 EIPR1Q53HC9 387 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 MTX3Q5HYI7 312 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 TRABD2AQ86V40 505 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 PNPLA8Q9NP80 782 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 KCND1Q9NSA2 647 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 NUP54Q7Z3B4 507 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 OR2AJ1Q8NGZ0 328 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 INPP4AQ96PE3 977 aaPredicted RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 NIFKQ9BYG3 293 aaKnown RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 FCF1Q9Y324 198 aaKnown RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 SLC38A8A6NNN8 435 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 MATN3O15232 486 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 ATG14Q6ZNE5 492 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 ZNF433Q8N7K0 673 aaPredicted RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 FBXO15Q8NCQ5 510 aaPredicted RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 SLC44A1Q8WWI5 657 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 MCCC2Q9HCC0 563 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 WBP11Q9Y2W2 641 aaKnown RBP22.87■■□□□ 1.25
NPAS3-201ENST00000346562 PLLPQ9Y342 182 aa22.87■■□□□ 1.25
NPAS3-201ENST00000346562 BCKDKO14874 412 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 HSF2Q03933 536 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 SERPINA9Q86WD7 417 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 HM13Q8TCT9 377 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 AGAP11Q8TF27 550 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 RFKQ969G6 155 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 RBM47A0AV96 593 aaKnown RBP22.86■■□□□ 1.25
NPAS3-201ENST00000346562 PRMT2P55345 433 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 GALNT5Q7Z7M9 940 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 BRSK1Q8TDC3 778 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 HMCESQ96FZ2 354 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 CPXM1Q96SM3 734 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 A0A1W2PPM1 405 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 TGFB1I1O43294 461 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 RGS20O76081 388 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 PBX3P40426 434 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 CCR10P46092 362 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 AMIGO1Q86WK6 493 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 OR2T34Q8NGX1 318 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 OR2T3Q8NH03 318 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 WFIKKN2Q8TEU8 576 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 ARL5CA6NH57 179 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 EPHB6O15197 1021 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 CASRP41180 1078 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 INAVAQ3KP66 663 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 ZMIZ2Q8NF64 920 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 ATG10Q9H0Y0 220 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 CERS4Q9HA82 394 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 DMTF1Q9Y222 760 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 EOMESO95936 686 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 C2P06681 752 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 PARP8Q8N3A8 854 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 SNX27Q96L92 541 aa22.86■■□□□ 1.25
NPAS3-201ENST00000346562 DHX33Q9H6R0 707 aaKnown RBP22.86■■□□□ 1.25
NPAS3-201ENST00000346562 CLCQ05315 142 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 RBM44Q6ZP01 1051 aaKnown RBP22.85■■□□□ 1.25
NPAS3-201ENST00000346562 C11orf84Q9BUA3 381 aaPredicted RBP22.85■■□□□ 1.25
NPAS3-201ENST00000346562 SLC17A7Q9P2U7 560 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 CPQQ9Y646 472 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 PAPSS2O95340 614 aaPredicted RBP22.85■■□□□ 1.25
NPAS3-201ENST00000346562 GNALP38405 381 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 ULK3Q6PHR2 472 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 IRF2BP2Q7Z5L9 587 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 FAR1Q8WVX9 515 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 NXNL1Q96CM4 212 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 PCDHGC3Q9UN70 934 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 COMMD3-BMI1R4GMX3 469 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 KCNU1A8MYU2 1149 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 ALOX5P09917 674 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 ATP5A1P25705 553 aaKnown RBP22.85■■□□□ 1.25
NPAS3-201ENST00000346562 AP3S2P59780 193 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 ABATP80404 500 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 SLC13A2Q13183 592 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 SPPL2CQ8IUH8 684 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 CHST4Q8NCG5 386 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 C11orf65Q8NCR3 313 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 MAN2B2Q9Y2E5 1009 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 U3KQV3 271 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 SASH3O75995 380 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 DRD4P21917 467 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 LIPEQ05469 1076 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 LCP2Q13094 533 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 HEPACAMQ14CZ8 416 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 PPP2R2DQ66LE6 453 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 TMEM220Q6QAJ8 160 aa22.85■■□□□ 1.25
NPAS3-201ENST00000346562 CRELD2Q6UXH1 353 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms