RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 UTS2BQ765I0 119 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 HMGN2P46Q86SG4 172 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 TMEM199Q8N511 208 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 OR4F6Q8NGB9 312 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 OR10A6Q8NH74 314 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 FAM110BQ8TC76 370 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 TSPAN18Q96SJ8 248 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 RTKNQ9BST9 563 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 LCHNA4D1U4 455 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 PDZK1P1A8MUH7 402 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 TTC34A8MYJ7 566 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 ELFN1P0C7U0 828 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 ACADSP16219 412 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 PRKAA2P54646 552 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 GRM2Q14416 872 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 INPP5AQ14642 412 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 CFAP206Q8IYR0 622 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 NKAPQ8N5F7 415 aaKnown RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 SMG7Q92540 1137 aaKnown RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 INTS7Q9NVH2 962 aaKnown RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 B4GALT6Q9UBX8 382 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 CLPTM1O96005 669 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 FGBP02675 491 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 VCLP18206 1134 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 IMPDH1P20839 514 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 IST1P53990 364 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 XKR6Q5GH73 641 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 GALNT5Q7Z7M9 940 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 SETD3Q86TU7 594 aaPredicted RBP13.14□□□□□ -0.31
CASC4-202ENST00000345795 LRRC49Q8IUZ0 686 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 KRTCAP2Q8N6L1 136 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 HAUS8Q9BT25 410 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 COQ10BQ9H8M1 238 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 BRD9Q9H8M2 597 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 POLG2Q9UHN1 485 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 PRSS21Q9Y6M0 314 aa13.14□□□□□ -0.31
CASC4-202ENST00000345795 LOXHD1Q8IVV2 1947 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 MAGEA13PA6NCF6 341 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 SLC22A3O75751 556 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 GSRP00390 522 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 MYCLP1P12525 358 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 PTGER1P34995 402 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ERVFC1P60507 584 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 IRX1P78414 480 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 TRIM71Q2Q1W2 868 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 PLEKHG6Q3KR16 790 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ATP13A5Q4VNC0 1218 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 KIAA0408Q6ZU52 694 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 MMAAQ8IVH4 418 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 CBR4Q8N4T8 237 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 FAM47BQ8NA70 645 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ROGDIQ9GZN7 287 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 ZBTB26Q9HCK0 441 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 IRAK4Q9NWZ3 460 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 CACNA1IQ9P0X4 2223 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 PRORSD1PA6NEY8 169 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 ANTXRLA6NF34 631 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 NPIPB15A6NHN6 443 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 CAPN14A8MX76 684 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 RFXAPO00287 272 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 EPHX1P07099 455 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 MMP2P08253 660 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 SLC20A2Q08357 652 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 GTF2H2Q13888 395 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 SPIDRQ14159 915 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 TAF1AQ15573 450 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 MAPKAPK3Q16644 382 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 GTF2H2CQ6P1K8 395 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 SPESP1Q6UW49 350 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 SYVN1Q86TM6 617 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 LILRA3Q8N6C8 439 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 CDK5RAP1Q96SZ6 601 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 RIOK2Q9BVS4 552 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 SLC46A2Q9BY10 475 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 TREX1Q9NSU2 369 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 KIAA1522Q9P206 1035 aaPredicted RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 IKZF3Q9UKT9 509 aa13.13□□□□□ -0.31
CASC4-202ENST00000345795 EIF3LQ9Y262 564 aaKnown RBP13.13□□□□□ -0.31
CASC4-202ENST00000345795 LOC730098B7Z3J9 87 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 POU1F1P28069 291 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 IRS1P35568 1242 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 LEPRP48357 1165 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 LSM3P62310 102 aaKnown RBP13.12□□□□□ -0.31
CASC4-202ENST00000345795 TMED1Q13445 227 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 SQLEQ14534 574 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 TMPRSS11BQ86T26 416 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 RBFAQ8N0V3 343 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 LKAAEAR1Q8TD35 194 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 C1orf74Q96LT6 269 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 INVSQ9Y283 1065 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 H0Y858 1186 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 KDELR3O43731 214 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 MAGEC1O60732 1142 aa13.12□□□□□ -0.31
CASC4-202ENST00000345795 LYNP07948 512 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms