RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PARP15Q460N3 678 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 FNDC3BQ53EP0 1204 aaKnown RBP19.17■□□□□ 0.66
HDAC4-201ENST00000345617 KCTD4Q8WVF5 259 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 SPATA9Q9BWV2 254 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 FARSBQ9NSD9 589 aaKnown RBP19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ENTPD6O75354 484 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 PRAMEF12O95522 483 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 MAPK12P53778 367 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 TSPAN5P62079 268 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 TXNL4AP83876 142 aaKnown RBP19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF45Q02386 682 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ECHDC2Q86YB7 292 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 S100PBPQ96BU1 408 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 AGAP2Q99490 1192 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 RNF38Q9H0F5 515 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 FBXO10Q9UK96 956 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 REPS2Q8NFH8 660 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ATG4CQ96DT6 458 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF286BP0CG31 522 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 NDUFA9Q16795 377 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 TAAR1Q96RJ0 339 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 PFDN5Q99471 154 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 SGK2Q9HBY8 427 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 FBXO5Q9UKT4 447 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ACOX3O15254 700 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF181Q2M3W8 571 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 FAM183BPQ6ZVS7 135 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 TCF7L1Q9HCS4 588 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 MAT2BQ9NZL9 334 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 U3KQV3 271 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 CLCA1A8K7I4 914 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 PER2O15055 1255 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 STK16O75716 305 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 ASGR1P07306 291 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 PTP4A2Q12974 167 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 SPOCK2Q92563 424 aa19.17■□□□□ 0.66
HDAC4-201ENST00000345617 A0A087X0B3 334 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CENPBD1B2RD01 187 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 KLHL36Q8N4N3 616 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 AARSD1Q9BTE6 412 aaKnown RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 TMEM39BQ9GZU3 492 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CCL15-CCL14A0A0B4J2E2 113 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 LACTBL1A8MY62 500 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 USP12O75317 370 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 AZGP1P25311 298 aaKnown RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CCL15Q16663 113 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 PARP8Q8N3A8 854 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 AURKBQ96GD4 344 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 ZSWIM3Q96MP5 696 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 IFNA21P01568 189 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 PRPS2P11908 318 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 TRAM1Q15629 374 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CRTC2Q53ET0 693 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 MKS1Q9NXB0 559 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 NKIRAS2Q9NYR9 191 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF282Q9UDV7 671 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 UBQLN2Q9UHD9 624 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 BTRCQ9Y297 605 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 FGL1Q08830 312 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 KLHL26Q53HC5 615 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CLEC10AQ8IUN9 316 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 TRIM36Q9NQ86 728 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 GLS2Q9UI32 602 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 REXO2Q9Y3B8 237 aaKnown RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 SPATA31D1Q6ZQQ2 1576 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 CASTOR2A6NHX0 329 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 SLITRK3O94933 977 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 GSTM3P21266 225 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 AFF1P51825 1210 aaKnown RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 ZNF829Q3KNS6 432 aaPredicted RBP19.16■□□□□ 0.66
HDAC4-201ENST00000345617 SLC25A52Q3SY17 297 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 NR4A3Q92570 626 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 C5orf51A6NDU8 294 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 SEZ6Q53EL9 994 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 XKR4Q5GH76 650 aa19.16■□□□□ 0.66
HDAC4-201ENST00000345617 AQP12BA6NM10 295 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 PPP3CAQ08209 521 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 DENND1CQ8IV53 801 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 AQP12AQ8IXF9 295 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 INPP4AQ96PE3 977 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 GBA3Q9H227 469 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 DNAJB9Q9UBS3 223 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 HACL1Q9UJ83 578 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MTHFD1P11586 935 aaKnown RBP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 GNALP38405 381 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 KHKP50053 298 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MIIPQ5JXC2 388 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 PCDH19Q8TAB3 1148 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 ACTR6Q9GZN1 396 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 DPAGT1Q9H3H5 408 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 POLR3BQ9NW08 1133 aaPredicted RBP19.15■□□□□ 0.66
HDAC4-201ENST00000345617 PRORSD1PA6NEY8 169 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 FAM46CQ5VWP2 391 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 BAIAP2L2Q6UXY1 529 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 GK5Q6ZS86 529 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 CYP2U1Q7Z449 544 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 TOMM5Q8N4H5 51 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 OR10H4Q8NGA5 316 aa19.15■□□□□ 0.66
HDAC4-201ENST00000345617 IKZF2Q9UKS7 526 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms