RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TAPT1Q6NXT6 567 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 TAF8Q7Z7C8 310 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 LIX1Q8N485 282 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 FCRL2Q96LA5 508 aaPredicted RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 I3L521 148 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 OR4F21O95013 312 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 LRG1P02750 347 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 RLN1P04808 185 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 PRPS2P11908 318 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 CYP2B6P20813 491 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 PRKAG1P54619 331 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 RIPPLY1Q0D2K3 151 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 ELAVL2Q12926 359 aaKnown RBP17.88■□□□□ 0.45
SMC4-201ENST00000344722 PGBD2Q6P3X8 592 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 STYXQ8WUJ0 223 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 GULP1Q9UBP9 304 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 KCNH4Q9UQ05 1017 aa17.88■□□□□ 0.45
SMC4-201ENST00000344722 LGALS2P05162 132 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 SLC2A2P11168 524 aaPredicted RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 ALDH7A1P49419 539 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 MAB21L1Q13394 359 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 GTF2H2Q13888 395 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 GTF2H2CQ6P1K8 395 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 RDH12Q96NR8 316 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 GPR21Q99679 349 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 NEK6Q9HC98 313 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 SLC17A6Q9P2U8 582 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 DNAJA1P31689 397 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 CCR10P46092 362 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 GSK3BP49841 420 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 MAZP56270 477 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 YAF2Q8IY57 180 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 COLGALT2Q8IYK4 626 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 CLIP4Q8N3C7 705 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 GALNT6Q8NCL4 622 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 OR52J3Q8NH60 311 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 VPS51Q9UID3 782 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 FZD10Q9ULW2 581 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 ASB3Q9Y575 518 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 ADAMTS3O15072 1205 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 REM1O75628 298 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 CLDN9O95484 217 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 OGNP20774 298 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 CDH12P55289 794 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 RHAGQ02094 409 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 TEAD4Q15561 434 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 DPYSL2Q16555 572 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 RNASE12Q5GAN4 147 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 DACT2Q5SW24 774 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 DCST1Q5T197 706 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 FKBP1CQ5VVH2 108 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 ZNF438Q7Z4V0 828 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 UFD1Q92890 307 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 AKTIPQ9H8T0 292 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 RAD18Q9NS91 495 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 PRKAG2Q9UGJ0 569 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 OAS3Q9Y6K5 1087 aaKnown RBP17.87■□□□□ 0.45
SMC4-201ENST00000344722 ANXA8P13928 327 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 SLC1A2P43004 574 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 OR52E8Q6IFG1 317 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 PJA1Q8NG27 643 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 C8orf48Q96LL4 319 aa17.87■□□□□ 0.45
SMC4-201ENST00000344722 QSOX1O00391 747 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLC28A2O43868 658 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 FGF3P11487 239 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 IL1R2P27930 398 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 DCDC1P59894 354 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 IQCCQ4KMZ1 466 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 GPR153Q6NV75 609 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 ABHD15Q6UXT9 468 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLITRK4Q8IW52 837 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 PHACTR4Q8IZ21 702 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMC4-201ENST00000344722 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 PAGE1O75459 146 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 IFNA16P05015 189 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 PROZP22891 400 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 TRIM48Q8IWZ4 208 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 PRICKLE1Q96MT3 831 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 RPF2Q9H7B2 306 aaKnown RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 TESMINQ9Y4I5 508 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 FUOMA2VDF0 154 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 OR14I1A6ND48 311 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 CLDN5O00501 218 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 TAS2R41P59536 307 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 HSDL1Q3SXM5 330 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 TMEM209Q96SK2 561 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLC9A7Q96T83 725 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLC30A2Q9BRI3 323 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 TLE6Q9H808 572 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 MKS1Q9NXB0 559 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 KANSL3Q9P2N6 904 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 SLC7A4O43246 635 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 BUD31P41223 144 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 GUCA1AP43080 201 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 KLF1Q13351 362 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 CRTC2Q53ET0 693 aaPredicted RBP17.86■□□□□ 0.45
SMC4-201ENST00000344722 CHSY3Q70JA7 882 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 LRP10Q7Z4F1 713 aa17.86■□□□□ 0.45
SMC4-201ENST00000344722 EFHD2Q96C19 240 aaPredicted RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms