RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 SCHIP1Q9P0W5 487 aaPredicted RBP12.21□□□□□ -0.45
SGCA-202ENST00000344627 PCDHA3Q9Y5H8 950 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 ADGRG1Q9Y653 693 aa12.21□□□□□ -0.45
SGCA-202ENST00000344627 MN1Q10571 1320 aaPredicted RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 GLYATL1P3A0A0U1RQE8 302 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 KCNN4O15554 427 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 RASSF9O75901 435 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 UBXN7O94888 489 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 C9P02748 559 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 AKT1P31749 480 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 CTNNA1P35221 906 aaKnown RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 SLC19A1P41440 591 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 HALP42357 657 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 RWDD2BP57060 319 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 CYP4F2P78329 520 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 TLE1Q04724 770 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 LDLRAP1Q5SW96 308 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 WASH2PQ6VEQ5 465 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 CDKL3Q8IVW4 592 aaPredicted RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 ACRBPQ8NEB7 543 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 C9orf43Q8TAL5 461 aaPredicted RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 ACTL9Q8TC94 416 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 DTX3LQ8TDB6 740 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 MRFAP1L1Q96HT8 127 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 CALR3Q96L12 384 aaKnown RBP12.2□□□□□ -0.46
SGCA-202ENST00000344627 TGM7Q96PF1 710 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 FCRL4Q96PJ5 515 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 VPS35Q96QK1 796 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 APOL2Q9BQE5 337 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 GBA3Q9H227 469 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 WASH6PQ9NQA3 447 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 POT1Q9NUX5 634 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 IL17CQ9P0M4 197 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 KCND3Q9UK17 655 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 TMPRSS11EQ9UL52 423 aa12.2□□□□□ -0.46
SGCA-202ENST00000344627 CCDC66A2RUB6 948 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 OR52A4PA6NMU1 304 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 C2orf81A6NN90 581 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 POP7O75817 140 aaKnown RBP12.19□□□□□ -0.46
SGCA-202ENST00000344627 STK17BO94768 372 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 TJP3O95049 919 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 RBP3P10745 1247 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 TCN2P20062 427 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 MSH3P20585 1137 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 PSMB4P28070 264 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 SEPHS1P49903 392 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 FOXM1Q08050 763 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 CDC20Q12834 499 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 ITGA9Q13797 1035 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 PTPRCAPQ14761 206 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 AADACL2Q6P093 401 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 TMEM220Q6QAJ8 160 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 RAD9BQ6WBX8 426 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 TMEM26Q6ZUK4 368 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 DET1Q7L5Y6 550 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 AMZ2Q86W34 360 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 ZNF547Q8IVP9 402 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 ZNF398Q8TD17 642 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 LRRC45Q96CN5 670 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 RAB33BQ9H082 229 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 ZNF624Q9P2J8 865 aaPredicted RBP12.19□□□□□ -0.46
SGCA-202ENST00000344627 AMFRQ9UKV5 643 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 PSMD13Q9UNM6 376 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 AAR2Q9Y312 384 aaKnown RBP12.19□□□□□ -0.46
SGCA-202ENST00000344627 ARL5AQ9Y689 179 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 SLC30A1Q9Y6M5 507 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 MYO18BQ8IUG5 2567 aa12.19□□□□□ -0.46
SGCA-202ENST00000344627 KLHL33A6NCF5 533 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 GOLGA6L3A6NEY3 463 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 OR2AG2A6NM03 316 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 PJA2O43164 708 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 GPR39O43194 453 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 DLGAP3O95886 979 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 LPOP22079 712 aaPredicted RBP12.18□□□□□ -0.46
SGCA-202ENST00000344627 STAT5AP42229 794 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 GFERP55789 205 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 ANKRD20A2Q5SQ80 823 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 GPRC6AQ5T6X5 926 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 ANKRD20A1Q5TYW2 823 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 AGAP9Q5VTM2 703 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 ANKRD20A3Q5VUR7 823 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 KLHL35Q6PF15 583 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 ABRAXAS1Q6UWZ7 409 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 PEX26Q7Z412 305 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 RASGEF1AQ8N9B8 481 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 CCDC110Q8TBZ0 833 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 RNF31Q96EP0 1072 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 ZDHHC12Q96GR4 267 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 C9orf72Q96LT7 481 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 BAG1Q99933 345 aaPredicted RBP12.18□□□□□ -0.46
SGCA-202ENST00000344627 LACRTQ9GZZ8 138 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 APMAPQ9HDC9 416 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 EPHA6Q9UF33 1036 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 EFR3BQ9Y2G0 817 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 BOD1L1Q8NFC6 3051 aa12.18□□□□□ -0.46
SGCA-202ENST00000344627 GRID2IPA4D2P6 1211 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
SGCA-202ENST00000344627 PRAMEF1O95521 474 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms