RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ST13P5Q8NFI4 369 aaPredicted RBP18.36■□□□□ 0.53
HOXA9-201ENST00000343483 OSCP1Q8WVF1 389 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 CDRT15Q96T59 188 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 TTYH1Q9H313 450 aaPredicted RBP18.36■□□□□ 0.53
HOXA9-201ENST00000343483 EFCAB1Q9HAE3 211 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 SLC8A2Q9UPR5 921 aa18.36■□□□□ 0.53
HOXA9-201ENST00000343483 A0A1B0GTL3 188 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 A0A1W2PQ67 120 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 CFLARO15519 480 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 CRCPO75575 148 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 C1SP09871 688 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PTPN5P54829 565 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ERVK-21P61565 698 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ARHGEF7Q14155 803 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ARSIQ5FYB1 569 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 BRAT1Q6PJG6 821 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 RNF111Q6ZNA4 994 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 C12orf40Q86WS4 652 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 DDIASQ8IXT1 998 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PGAM4Q8N0Y7 254 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 TWIST2Q8WVJ9 160 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PDLIM5Q96HC4 596 aaKnown RBP18.35■□□□□ 0.53
HOXA9-201ENST00000343483 C3orf30Q96M34 536 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ECSITQ9BQ95 431 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 EIF2B4Q9UI10 523 aaKnown RBP18.35■□□□□ 0.53
HOXA9-201ENST00000343483 CD84Q9UIB8 345 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PCTPQ9UKL6 214 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PTGDR2Q9Y5Y4 395 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ADH1CP00326 375 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 FGF4P08620 206 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 RGS4P49798 205 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 RBBP7Q16576 425 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 KANK2Q63ZY3 851 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 MACC1Q6ZN28 852 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 CHSY3Q70JA7 882 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ADAMTSL2Q86TH1 951 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PLPP6Q8IY26 295 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 MYO1HQ8N1T3 1032 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ZNF366Q8N895 744 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 UCMAQ8WVF2 138 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 ZFYVE19Q96K21 471 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 SAMD11Q96NU1 681 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 WDR41Q9HAD4 459 aa18.35■□□□□ 0.53
HOXA9-201ENST00000343483 PIP5K1BO14986 540 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 NSG1P42857 185 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 SPINT3P49223 89 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 CDC16Q13042 620 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 POM121L1PQ3SYA9 428 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 GK5Q6ZS86 529 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 KBTBD6Q86V97 674 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ZBTB2Q8N680 514 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ZNF483Q8TF39 744 aaPredicted RBP18.34■□□□□ 0.53
HOXA9-201ENST00000343483 PLEKHG4BQ96PX9 1271 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 COPS8Q99627 209 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 NPAS2Q99743 824 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 HGH1Q9BTY7 390 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 NUDT4Q9NZJ9 180 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 FBXO10Q9UK96 956 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ADAMTS6Q9UKP5 1117 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 TMCO1Q9UM00 188 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ASB1Q9Y576 335 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 SCN8AQ9UQD0 1980 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 AGAP14A8MT82 685 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 DGKAP23743 735 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 THOP1P52888 689 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 SQLEQ14534 574 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ZNF423Q2M1K9 1284 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 PIGGQ5H8A4 983 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 SBSNQ6UWP8 590 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 LARP4Q71RC2 724 aaKnown RBP eCLIP18.34■□□□□ 0.53
HOXA9-201ENST00000343483 TIFAQ96CG3 184 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 C1QTNF3Q9BXJ4 246 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 EBF3Q9H4W6 596 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 FBRSL1Q9HCM7 1045 aaKnown RBP18.34■□□□□ 0.53
HOXA9-201ENST00000343483 MRGBPQ9NV56 204 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 ZDHHC3Q9NYG2 299 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 IL36AQ9UHA7 158 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 BTRCQ9Y297 605 aa18.34■□□□□ 0.53
HOXA9-201ENST00000343483 MLYCDO95822 493 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 S100BP04271 92 aaPredicted RBP18.33■□□□□ 0.52
HOXA9-201ENST00000343483 CTSLP07711 333 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 CISD3P0C7P0 127 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 PKNOX1P55347 436 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 GPRC6AQ5T6X5 926 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 ZDHHC20Q5W0Z9 365 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 TMEM154Q6P9G4 183 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 NPAS3Q8IXF0 933 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 APOL5Q9BWW9 433 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 SPATA16Q9BXB7 569 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 AKTIPQ9H8T0 292 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 SPATS2LQ9NUQ6 558 aaKnown RBP18.33■□□□□ 0.52
HOXA9-201ENST00000343483 PKD2L2Q9NZM6 624 aa18.33■□□□□ 0.52
HOXA9-201ENST00000343483 SPTBN5Q9NRC6 3674 aaKnown RBP18.33■□□□□ 0.52
HOXA9-201ENST00000343483 A6NHS1 94 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 H3BNX3 289 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 E2F3O00716 465 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 GIPC1O14908 333 aa18.32■□□□□ 0.52
HOXA9-201ENST00000343483 HOXC11O43248 304 aaPredicted RBP18.32■□□□□ 0.52
HOXA9-201ENST00000343483 TULP3O75386 442 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms