RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 SYCE1LA8MT33 242 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SUPT3HB4E1H0 165 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 K7ESM1 405 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 PLRG1O43660 514 aaKnown RBP17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SUPT3HO75486 399 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 HSPA4LO95757 839 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 FTH1P02794 183 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SBK3P0C264 359 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CREB5Q02930 508 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CRY1Q16526 586 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 NAPRTQ6XQN6 538 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SLC22A9Q8IVM8 553 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 TMEM151AQ8N4L1 468 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 CCDC197Q8NCU1 140 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 RHEBL1Q8TAI7 183 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 KLK6Q92876 244 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 PTERQ96BW5 349 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 PHF21BQ96EK2 531 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SEC16BQ96JE7 1060 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 C1QTNF7Q9BXJ2 289 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 TBC1D17Q9HA65 648 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 LMAN1LQ9HAT1 526 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 NPHS2Q9NP85 383 aa17.1■□□□□ 0.33
CLDN4-201ENST00000340958 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 STK25O00506 426 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 RNGTTO60942 597 aaKnown RBP17.09■□□□□ 0.33
CLDN4-201ENST00000340958 GFAPP14136 432 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 NDUFV2P19404 249 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 NAGLUP54802 743 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 ADPRHP54922 357 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 ABCE1P61221 599 aaKnown RBP17.09■□□□□ 0.33
CLDN4-201ENST00000340958 BOP1Q14137 746 aaKnown RBP17.09■□□□□ 0.33
CLDN4-201ENST00000340958 TSNQ15631 228 aaKnown RBP17.09■□□□□ 0.33
CLDN4-201ENST00000340958 KIAA1161Q6NSJ0 714 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 Q6ZS52 159 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 TRIM74Q86UV6 250 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 ELMO1Q92556 727 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 LATS2Q9NRM7 1088 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 FZD4Q9ULV1 537 aa17.09■□□□□ 0.33
CLDN4-201ENST00000340958 A0A1W2PQU0 124 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 NEMP2A6NFY4 417 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 TARM1B6A8C7 271 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 CDC7O00311 574 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 KPNA5O15131 536 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 SNX3O60493 162 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 KERAO60938 352 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 ATG13O75143 517 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 CDK14O94921 469 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 PAK4O96013 591 aaPredicted RBP17.08■□□□□ 0.33
CLDN4-201ENST00000340958 KITP10721 976 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 STARD6P59095 220 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 HSPA14Q0VDF9 509 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 OR4D1Q15615 310 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 SYTL3Q4VX76 610 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 KHDC1Q4VXA5 237 aaKnown RBP17.08■□□□□ 0.33
CLDN4-201ENST00000340958 USP30Q70CQ3 517 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 PIWIL4Q7Z3Z4 852 aaKnown RBP17.08■□□□□ 0.33
CLDN4-201ENST00000340958 PIGWQ7Z7B1 504 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 NLRP8Q86W28 1048 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 PELI3Q8N2H9 469 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 C7orf26Q96N11 449 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 LENG8Q96PV6 779 aaPredicted RBP17.08■□□□□ 0.33
CLDN4-201ENST00000340958 OR2AG1Q9H205 316 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 ZNF395Q9H8N7 513 aaPredicted RBP17.08■□□□□ 0.33
CLDN4-201ENST00000340958 NCKIPSDQ9NZQ3 722 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 FAM8A1Q9UBU6 413 aa17.08■□□□□ 0.33
CLDN4-201ENST00000340958 TMEM114B3SHH9 223 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 UBXN8O00124 270 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 EBAG9O00559 213 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 SNX2O60749 519 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 LYPLA1O75608 230 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 IPO13O94829 963 aaKnown RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CHRNB1P11230 501 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 MAT2AP31153 395 aaKnown RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CCR7P32248 378 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 ACSBG2Q5FVE4 666 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PNCKQ6P2M8 343 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 TMEM220Q6QAJ8 160 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 GPSM1Q86YR5 675 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 BEND7Q8N7W2 519 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 RASGEF1AQ8N9B8 481 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 HIC2Q96JB3 615 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 GATA5Q9BWX5 397 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 FOXQ1Q9C009 403 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PREBQ9HCU5 417 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 KLHL14Q9P2G3 628 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PLXNA2O75051 1894 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 NCF1BA6NI72 391 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 A8MT66 165 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 NCF1CA8MVU1 366 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 PI15O43692 258 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 SNNO75324 88 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 TSPAN12O95859 305 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 SOD1P00441 154 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 S100BP04271 92 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CBSLP0DN79 551 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 NCF1P14598 390 aaPredicted RBP17.07■□□□□ 0.32
CLDN4-201ENST00000340958 CBSP35520 551 aa17.07■□□□□ 0.32
CLDN4-201ENST00000340958 KCNC1P48547 511 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms