RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 INO80CQ6PI98 192 aaPredicted RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 TMEM220Q6QAJ8 160 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ABRAXAS1Q6UWZ7 409 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 PPP1R21Q6ZMI0 780 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ZNF534Q76KX8 674 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 PIANPQ8IYJ0 282 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 MAGOHBQ96A72 148 aaKnown RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 ULK4Q96C45 1275 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 SGF29Q96ES7 293 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ZNF778Q96MU6 729 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 TTC25Q96NG3 672 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 OSGEPL1Q9H4B0 414 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 CPNE5Q9HCH3 593 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 SARS2Q9NP81 518 aaKnown RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 ZNF624Q9P2J8 865 aaPredicted RBP15.13■□□□□ 0.01
VAPA-201ENST00000340541 CRLS1Q9UJA2 301 aa15.13■□□□□ 0.01
VAPA-201ENST00000340541 ATMQ13315 3056 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 IGHV1OR21-1A0A087WYE8 117 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 KIR2DS5A0A0G2JLQ3 304 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 A0A0G2JNG1 304 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 TCRBV7S3A2A0A539 114 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 HEATR9A2RTY3 570 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 OR5K4A6NMS3 321 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 KIR2DS3K7RE56 304 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 MSH3P20585 1137 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 ADRA1DP25100 572 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 ALDH4A1P30038 563 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 AKT1P31749 480 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 CCKBRP32239 447 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 COILP38432 576 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 MAGEA6P43360 314 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 UBE2IP63279 158 aaKnown RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 BASP1P80723 227 aaKnown RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 ACVR1Q04771 509 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 ZFP36L1Q07352 338 aaKnown RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 SQSTM1Q13501 440 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 KIR2DS5Q14953 304 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 BCL7AQ4VC05 210 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 FNBP1LQ5T0N5 605 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 AGAP9Q5VTM2 703 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 WASH2PQ6VEQ5 465 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 FAM83HQ6ZRV2 1179 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 DET1Q7L5Y6 550 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 AMZ2Q86W34 360 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 SLITRK4Q8IW52 837 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 BEND7Q8N7W2 519 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 NAP1L3Q99457 506 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 FOXP3Q9BZS1 431 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 STRADBQ9C0K7 418 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 RDH14Q9HBH5 336 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 WASH6PQ9NQA3 447 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 SLC2A6Q9UGQ3 507 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 RIMKLBQ9ULI2 386 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 WDR37Q9Y2I8 494 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 PCDHGA7Q9Y5G6 932 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 DNMT3AQ9Y6K1 912 aaPredicted RBP15.12■□□□□ 0.01
VAPA-201ENST00000340541 SLC30A1Q9Y6M5 507 aa15.12■□□□□ 0.01
VAPA-201ENST00000340541 CCDC162PA2VCL2 907 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 OR51F1A6NGY5 319 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 KCNJ13O60928 360 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 PHF2O75151 1096 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TNFSF15O95150 251 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 CPNE6O95741 557 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 KRT14P02533 472 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 PLA2G2AP14555 144 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 SLC2A4P14672 509 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 XRCC1P18887 633 aaPredicted RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 TPSB2P20231 275 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 IDSP22304 550 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 ACRV1P26436 265 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 FOXN2P32314 431 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 CSF2RBP32927 897 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 SLC19A1P41440 591 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 DRG2P55039 364 aaKnown RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 GNG11P61952 73 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 HHEXQ03014 270 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 KCNJ11Q14654 390 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TPSAB1Q15661 275 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 SEPT7Q16181 437 aaKnown RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 CLPPQ16740 277 aaPredicted RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 SKIDA1Q1XH10 827 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 AMZ1Q400G9 498 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 ZRANB3Q5FWF4 1079 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TSTD2Q5T7W7 516 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 NKAIN2Q5VXU1 208 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 PAPD7Q5XG87 772 aaKnown RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 CCDC137Q6PK04 289 aaKnown RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 ZNF574Q6ZN55 896 aaPredicted RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 SLC9B2Q86UD5 537 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 SERPINA9Q86WD7 417 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TTC9Q92623 222 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 TMEM159Q96B96 161 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 ZNF514Q96K75 400 aaPredicted RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 LINC00615Q96LM1 132 aaPredicted RBP15.11■□□□□ 0.01
VAPA-201ENST00000340541 TMEM74Q96NL1 305 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 COPS8Q99627 209 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 NUDT22Q9BRQ3 303 aa15.11■□□□□ 0.01
VAPA-201ENST00000340541 SEMA6CQ9H3T2 930 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms