RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 HTR1BP28222 390 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 MTHFRP42898 656 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PSEN2P49810 448 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 DNASE1L3Q13609 305 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PTGR1Q14914 329 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FSCN1Q16658 493 aaKnown RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 RAB44Q7Z6P3 723 aaPredicted RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 TMEM179BQ7Z7N9 219 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 C10orf111Q8N326 155 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 TMCO5AQ8N6Q1 288 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FRS2Q8WU20 508 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 INTS10Q9NVR2 710 aaKnown RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 AIG1Q9NVV5 245 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PCDHB3Q9Y5E6 796 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 A0A0D9SEW6 157 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 CFAP99D6REC4 459 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 B4GALT3O60512 393 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 SNAP91O60641 907 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 MATN4O95460 622 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FGF4P08620 206 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 MBL2P11226 248 aaPredicted RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 HOXC13P31276 330 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 RGRP47804 291 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 CPT1AP50416 773 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 RAD23AP54725 363 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 IFITM3Q01628 133 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 CAMK2BQ13554 666 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FNDC1Q4ZHG4 1894 aaPredicted RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 AFMIDQ63HM1 303 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 LAIR2Q6ISS4 152 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 TIGD7Q6NT04 549 aaPredicted RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 ZNF773Q6PK81 442 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PIANPQ8IYJ0 282 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PHACTR4Q8IZ21 702 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 TMEM199Q8N511 208 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 PDPRQ8NCN5 879 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 CLHC1Q8NHS4 586 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 CNIH3Q8TBE1 160 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 GFM2Q969S9 779 aaKnown RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FUBP1Q96AE4 644 aaKnown RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 AURKBQ96GD4 344 aaPredicted RBP11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 NSMCE2Q96MF7 247 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 MYOCQ99972 504 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 HGH1Q9BTY7 390 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 BEGAINQ9BUH8 593 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FUNDC2Q9BWH2 189 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 ACTL8Q9H568 366 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 ARNT2Q9HBZ2 717 aa11.82□□□□□ -0.52
CCDC144CP-201ENST00000340196 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 NOL3O60936 208 aaKnown RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CBFA2T3O75081 653 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 PRSS23O95084 383 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 ALPLP05186 524 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CYP4B1P13584 511 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CRHBPP24387 322 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 PCSK1P29120 753 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MLLT6P55198 1093 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 TPD52P55327 224 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 NFKB2Q00653 900 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MAPK11Q15759 364 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MS4A13Q5J8X5 152 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 C6orf136Q5SQH8 315 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 LETMD1Q6P1Q0 360 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SPESP1Q6UW49 350 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 Q6ZSR9 355 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SPARTQ8N0X7 666 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 TRIM54Q9BYV2 358 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SMOC2Q9H3U7 446 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 VAPAQ9P0L0 249 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 POLR3HQ9Y535 204 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SCAMP3O14828 347 aaKnown RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MGEA5O60502 916 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SNX2O60749 519 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MITFO75030 526 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SULT1C4O75897 302 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CPNE6O95741 557 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 THRBP10828 461 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 RENBPP51606 427 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 IL1RL1Q01638 556 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 PSAPL1Q6NUJ1 521 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 FBXL22Q6P050 247 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 PRMT9Q6P2P2 845 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 CD300LGQ6UXG3 332 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 MILR1Q7Z6M3 343 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 TBC1D21Q8IYX1 336 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 SFRP1Q8N474 314 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 ABHD11Q8NFV4 315 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 OR4K2Q8NGD2 314 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 OR4L1Q8NH43 312 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 ZNF420Q8TAQ5 688 aaPredicted RBP11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 ITFG1Q8TB96 612 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 BPIFB1Q8TDL5 484 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 EEF1AKMT1Q8WVE0 214 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 ABCG8Q9H221 673 aa11.81□□□□□ -0.52
CCDC144CP-201ENST00000340196 TPK1Q9H3S4 243 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms