RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 SLC30A1Q9Y6M5 507 aa14.35□□□□□ -0.11
ERCC1-203ENST00000340192 PRAMEF33A0A0G2JMD5 474 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 CCDC78A2IDD5 438 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 MROH6A6NGR9 719 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 LILRA5A6NI73 299 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 H7C0S8 307 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 HGSO14964 777 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-203ENST00000340192 APRTP07741 180 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 THRAP10827 490 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 RALBP11234 206 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 SLC5A2P31639 672 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 RPL22P35268 128 aaKnown RBP14.34□□□□□ -0.11
ERCC1-203ENST00000340192 ETV5P41161 510 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 GRIA1P42261 906 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 CDKN1CP49918 316 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-203ENST00000340192 TLE3Q04726 772 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 TRA2AQ13595 282 aaKnown RBP eCLIP14.34□□□□□ -0.11
ERCC1-203ENST00000340192 NFE2L1Q14494 772 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 CLCA4Q14CN2 919 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 GPR33Q49SQ1 333 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 CCDC38Q502W7 563 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 ZRANB3Q5FWF4 1079 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 TMEM71Q6P5X7 295 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 PPP1R21Q6ZMI0 780 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 TMEM26Q6ZUK4 368 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 GSTA5Q7RTV2 222 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 REXO1L1PQ8IX06 675 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 STYXQ8WUJ0 223 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 NCSTNQ92542 709 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 CXorf40BQ96DE9 158 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 DCUN1D1Q96GG9 259 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 COPS8Q99627 209 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 KCNF1Q9H3M0 494 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 UCK1Q9HA47 277 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 AKAP7Q9P0M2 348 aaPredicted RBP14.34□□□□□ -0.11
ERCC1-203ENST00000340192 PSMD13Q9UNM6 376 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 JRKLQ9Y4A0 524 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 PCDHGA7Q9Y5G6 932 aa14.34□□□□□ -0.11
ERCC1-203ENST00000340192 TRBV5-4A0A0C4DH59 114 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 KLK10O43240 276 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 SGTAO43765 313 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 GAS8O95995 478 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 PRSS56P0CW18 603 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 CCL4P13236 92 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 ACRV1P26436 265 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 HALP42357 657 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 KCNJ1P48048 391 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 MAPK10P53779 464 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 BCL7AQ4VC05 210 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 SNAP47Q5SQN1 464 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 METRNLQ641Q3 311 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 TAS2R42Q7RTR8 314 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 PDZD3Q86UT5 571 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 OR2L2Q8NH16 312 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 CDKN2AIPNLQ96HQ2 116 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 DPH1Q9BZG8 443 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 EPB41L1Q9H4G0 881 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 SLC40A1Q9NP59 571 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 HOMER3Q9NSC5 361 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 POT1Q9NUX5 634 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 PDP2Q9P2J9 529 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 FAM8A1Q9UBU6 413 aa14.33□□□□□ -0.12
ERCC1-203ENST00000340192 IGLV3-16A0A075B6K0 115 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 MGAT4DA6NG13 374 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 CFAP99D6REC4 459 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 NVLO15381 856 aaKnown RBP14.32□□□□□ -0.12
ERCC1-203ENST00000340192 PRAMEF10O60809 474 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 UBXN7O94888 489 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 ATP1B2P14415 290 aaPredicted RBP14.32□□□□□ -0.12
ERCC1-203ENST00000340192 PSMA3P25788 255 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 CSTF2P33240 577 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERCC1-203ENST00000340192 ARSDP51689 593 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 CACNG1Q06432 222 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 GPR18Q14330 331 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 SKIDA1Q1XH10 827 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 SERPINA9Q86WD7 417 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 RBM12BQ8IXT5 1001 aaKnown RBP14.32□□□□□ -0.12
ERCC1-203ENST00000340192 PIANPQ8IYJ0 282 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 PRELID2Q8N945 189 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 AGBL5Q8NDL9 886 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 HEXDCQ8WVB3 486 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 USP7Q93009 1102 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 LINC00615Q96LM1 132 aaPredicted RBP14.32□□□□□ -0.12
ERCC1-203ENST00000340192 CASS4Q9NQ75 786 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 ZDHHC3Q9NYG2 299 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 OGFRQ9NZT2 677 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 PIKFYVEQ9Y2I7 2098 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 ZFYVE26Q68DK2 2539 aa14.32□□□□□ -0.12
ERCC1-203ENST00000340192 FAM208BQ5VWN6 2430 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 HEATR9A2RTY3 570 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 KLHL33A6NCF5 533 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 OR51F1A6NGY5 319 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 A8MU76 341 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 C9orf172C9J069 976 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 ZSCAN12O43309 604 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 FGF3P11487 239 aaPredicted RBP14.31□□□□□ -0.12
ERCC1-203ENST00000340192 TYRP1P17643 537 aa14.31□□□□□ -0.12
ERCC1-203ENST00000340192 MSNP26038 577 aaKnown RBP14.31□□□□□ -0.12
ERCC1-203ENST00000340192 PRLHRP49683 370 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms