RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 PJA1Q8NG27 643 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 OR4L1Q8NH43 312 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ZFP28Q8NHY6 868 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 PNPT1Q8TCS8 783 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 OVCA2Q8WZ82 227 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TFAP2CQ92754 450 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 PPP1R14BQ96C90 147 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TCEAL4Q96EI5 215 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SHDQ96IW2 340 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 HIC2Q96JB3 615 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 CNDP2Q96KP4 475 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 MARK4Q96L34 752 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 MYRFLQ96LU7 910 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TMEM209Q96SK2 561 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 CORO1BQ9BR76 489 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 ALG9Q9H6U8 611 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 COQ10BQ9H8M1 238 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 AKTIPQ9H8T0 292 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TNFRSF12AQ9NP84 129 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 TLR8Q9NR97 1041 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 AGPAT4Q9NRZ5 378 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 AIG1Q9NVV5 245 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 DUS2Q9NX74 493 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 TAS2R13Q9NYV9 303 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 MPP6Q9NZW5 540 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 CCDC167Q9P0B6 97 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SEPT3Q9UH03 358 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 AFF4Q9UHB7 1163 aaKnown RBP10.67□□□□□ -0.7
RTN3-201ENST00000338850 ZNF639Q9UID6 485 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 RNF11Q9Y3C5 154 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SIT1Q9Y3P8 196 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 USP34Q70CQ2 3546 aa10.67□□□□□ -0.7
RTN3-201ENST00000338850 SCN8AQ9UQD0 1980 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 SPTBN4Q9H254 2564 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 DHRS12A0PJE2 317 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CCDC78A2IDD5 438 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 C7orf72A4D263 438 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 J3KR12 359 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 NME4O00746 187 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 NRG2O14511 850 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 ECI2O75521 394 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PGM3O95394 542 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 UROSP10746 265 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 HAPLN1P10915 354 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 CDH2P19022 906 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 CR2P20023 1033 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 IL10P22301 178 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 FCARP24071 287 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PSMA4P25789 261 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 YWHAQP27348 245 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CCR2P41597 374 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 SH3BP2P78314 561 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PRKCQQ04759 706 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 RAD51Q06609 339 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 ZNF235Q14590 738 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 TAF1AQ15573 450 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 ATP6AP1Q15904 470 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PCSK7Q16549 785 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 MYLK3Q32MK0 819 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 SLC44A4Q53GD3 710 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 ALFQ53S48 1182 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 HMBOX1Q6NT76 420 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 FBXL22Q6P050 247 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 RNF19BQ6ZMZ0 732 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 RBM44Q6ZP01 1051 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 CHST9Q7L1S5 443 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 ARHGAP22Q7Z5H3 698 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PTAR1Q7Z6K3 402 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 RETREG3Q86VR2 466 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 ERI1Q8IV48 349 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 SLC15A3Q8IY34 581 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 TBC1D21Q8IYX1 336 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PGBD5Q8N414 524 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CARNMT1Q8N4J0 409 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 AADATQ8N5Z0 425 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PCDH20Q8N6Y1 951 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 TSPAN14Q8NG11 270 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 OR6P1Q8NGX9 317 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PSMG2Q969U7 264 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 SGF29Q96ES7 293 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 RMND5BQ96G75 393 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 CENPNQ96H22 339 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 PDLIM5Q96HC4 596 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 PPP1R36Q96LQ0 422 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CNBD2Q96M20 576 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PSKH2Q96QS6 385 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PRPF18Q99633 342 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 TTLL2Q9BWV7 592 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PLA2G2FQ9BZM2 168 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 CLK4Q9HAZ1 481 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 CYP4F12Q9HCS2 524 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 MARCH4Q9P2E8 410 aaPredicted RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 MAP10Q9P2G4 905 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 MAFFQ9ULX9 164 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 G3BP2Q9UN86 482 aaKnown RBP10.66□□□□□ -0.7
RTN3-201ENST00000338850 AP3M1Q9Y2T2 418 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 PCDHA9Q9Y5H5 950 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 SNX13Q9Y5W8 968 aa10.66□□□□□ -0.7
RTN3-201ENST00000338850 GPR45Q9Y5Y3 372 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms