RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ANXA4P09525 319 aaPredicted RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 CXCR2P25025 360 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 NAE1Q13564 534 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PHYKPLQ8IUZ5 450 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 PPM1MQ96MI6 270 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 OLFM1Q99784 485 aa6.22□□□□□ -1.41
PRKDC-202ENST00000338368 EXOSC4Q9NPD3 245 aaKnown RBP6.22□□□□□ -1.41
PRKDC-202ENST00000338368 IQCF5A8MTL0 148 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SDHDO14521 159 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 NBNO60934 754 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ATG13O75143 517 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 GKP32189 559 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ADAM17P78536 824 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 EPS8Q12929 822 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 CSTF3Q12996 717 aaKnown RBP6.21□□□□□ -1.41
PRKDC-202ENST00000338368 CBX2Q14781 532 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-202ENST00000338368 INO80DQ53TQ3 878 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-202ENST00000338368 PITRM1Q5JRX3 1037 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 PSAPL1Q6NUJ1 521 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 MTSS1LQ765P7 747 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 LPCAT2Q7L5N7 544 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 TBC1D21Q8IYX1 336 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 BTBD9Q96Q07 612 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 NLNQ9BYT8 704 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 POPDC3Q9HBV1 291 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SGK2Q9HBY8 427 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SLC35G4P0C7Q5 338 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 HPCAP84074 193 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ZNF534Q76KX8 674 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 CLVS1Q8IUQ0 354 aaPredicted RBP6.21□□□□□ -1.41
PRKDC-202ENST00000338368 DACH2Q96NX9 599 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ARNT2Q9HBZ2 717 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 GIMAP2Q9UG22 337 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SNX8Q9Y5X2 465 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SPAG17Q6Q759 2223 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 FAM149AA5PLN7 773 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 STX16-NPEPL1H3BU86 382 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 PRPS2P11908 318 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 GDF5P43026 501 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ARSIQ5FYB1 569 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ANXA8L1Q5VT79 327 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 OR4F6Q8NGB9 312 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ALG2Q9H553 416 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 ADGRE2Q9UHX3 823 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 SPACA6W5XKT8 324 aa6.21□□□□□ -1.41
PRKDC-202ENST00000338368 PER2O15055 1255 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 CRATP43155 626 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RPS14P62263 151 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 MTX3Q5HYI7 312 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 CAPN13Q6MZZ7 669 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 TPD52L3Q96J77 140 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 QRFPRQ96P65 431 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 OSER1Q9NX31 292 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 NAV1Q8NEY1 1877 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 MYLK3Q32MK0 819 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ZCCHC8Q6NZY4 707 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ZBTB26Q9HCK0 441 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 INPP1P49441 399 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ZIK1Q3SY52 487 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 Q6ZVU0 165 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 GPR156Q8NFN8 814 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 OR9I1Q8NGQ6 314 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 OSBPL11Q9BXB4 747 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 C1QTNF7Q9BXJ2 289 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 C11orf49Q9H6J7 331 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 EBF2Q9HAK2 575 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 NELFEP18615 380 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 HNF4AP41235 474 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 THOP1P52888 689 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ERVK-8P63133 956 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 BLMHQ13867 455 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 C16orf72Q14CZ0 275 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 TMCO2Q7Z6W1 182 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ADCK1Q86TW2 530 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RIOK2Q9BVS4 552 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 WNT6Q9Y6F9 365 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 HHLA1C9JL84 531 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 SNNO75324 88 aaPredicted RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 PAX7P23759 505 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ECT2LQ008S8 904 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RAB33AQ14088 237 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 SLC39A5Q6ZMH5 540 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 MIPEPQ99797 713 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 DDX18Q9NVP1 670 aaKnown RBP6.21□□□□□ -1.42
PRKDC-202ENST00000338368 C3orf18Q9UK00 162 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 WASH4PA8MWX3 477 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 GLDCP23378 1020 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RFC2P35250 354 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 NR1H2P55055 460 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 ELP6Q0PNE2 266 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 KRT78Q8N1N4 520 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.21□□□□□ -1.426e-7■□□□□ 9.3
PRKDC-202ENST00000338368 POF1BQ8WVV4 589 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 LRTOMTQ8WZ04 291 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 SLC39A3Q9BRY0 314 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RIBC2Q9H4K1 309 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RETREG1Q9H6L5 497 aa6.21□□□□□ -1.42
PRKDC-202ENST00000338368 RAB23Q9ULC3 237 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms