RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CAPN12Q6ZSI9 719 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 MICALCLQ6ZW33 695 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 NRROSQ86YC3 692 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 NAXDQ8IW45 347 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 CFAP206Q8IYR0 622 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 UNC5BQ8IZJ1 945 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 BEND7Q8N7W2 519 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 PNPLA1Q8N8W4 532 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 OR2L2Q8NH16 312 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 CCL4L1Q8NHW4 92 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 WDR83Q9BRX9 315 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 OSGEPL1Q9H4B0 414 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 NSMCE4AQ9NXX6 385 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 IL1RAPL1Q9NZN1 696 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 TAAR2Q9P1P5 351 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 GULP1Q9UBP9 304 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 SLC23A2Q9UGH3 650 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 GNPTGQ9UJJ9 305 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 ACSL5Q9ULC5 683 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 KCNK6Q9Y257 313 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 DNAJC16Q9Y2G8 782 aa11.72□□□□□ -0.53
SPTLC1-202ENST00000337841 PTPRZ1P23471 2315 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRK1Q38SD2 2015 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 OR5K4A6NMS3 321 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 TRIM38O00635 465 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 KPNA5O15131 536 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 SIGLEC6O43699 453 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 SGTAO43765 313 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 TRIM16O95361 564 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 TUBBP07437 444 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 CELA2BP08218 269 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PKMP14618 531 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 CSRP1P21291 193 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 LEPRP48357 1165 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 ADARP55265 1226 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 EIF3BP55884 814 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PLOD1Q02809 727 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 DMPKQ09013 629 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 BIRC2Q13490 618 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 RSPO4Q2I0M5 234 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PLA2G4EQ3MJ16 856 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 C6orf132Q5T0Z8 1188 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 TRMT10BQ6PF06 316 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 C11orf96Q7Z7L8 435 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 DENND6AQ8IWF6 608 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 CNTN4Q8IWV2 1026 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 FAM181AQ8N9Y4 354 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 C2CD4AQ8NCU7 369 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 HM13Q8TCT9 377 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 ZDHHC1Q8WTX9 485 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 LPGAT1Q92604 370 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PANX3Q96QZ0 392 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 RTKNQ9BST9 563 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 P2RY12Q9H244 342 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 CAAP1Q9H8G2 361 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PLAC1Q9HBJ0 212 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 LRRC4CQ9HCJ2 640 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 FBXO6Q9NRD1 293 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 SPATS2LQ9NUQ6 558 aaKnown RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 FTSJ1Q9UET6 329 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PCOLCE2Q9UKZ9 415 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 BTBD3Q9Y2F9 522 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 CRYL1Q9Y2S2 319 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PCYT1BQ9Y5K3 369 aaPredicted RBP11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 COMMD10Q9Y6G5 202 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 PRSS21Q9Y6M0 314 aa11.71□□□□□ -0.53
SPTLC1-202ENST00000337841 KNL1Q8NG31 2342 aa11.71□□□□□ -0.54
SPTLC1-202ENST00000337841 RIF1Q5UIP0 2472 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 PDZK1P1A8MUH7 402 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 TM4SF5O14894 197 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 HAUS5O94927 633 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 GIMD1P0DJR0 217 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 CHRM3P20309 590 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 ECHS1P30084 290 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 STX2P32856 288 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 PI4KAP42356 2102 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 HALP42357 657 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC1A2P43004 574 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 GPX6P59796 221 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 DAB2P98082 770 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 RPA4Q13156 261 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 NR0B2Q15466 257 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 METRNLQ641Q3 311 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 IYDQ6PHW0 289 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 ABRAXAS1Q6UWZ7 409 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 WASH2PQ6VEQ5 465 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 TRMT10CQ7L0Y3 403 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 PIP4P1Q86T03 277 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 SLC26A11Q86WA9 606 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 OR6C4Q8NGE1 309 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 NAT14Q8WUY8 206 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 ELMO1Q92556 727 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 CNDP2Q96KP4 475 aaKnown RBP11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 ANKZF1Q9H8Y5 726 aa11.7□□□□□ -0.54
SPTLC1-202ENST00000337841 WASH6PQ9NQA3 447 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms