RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 HIST1H2AJQ99878 128 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 TRAF4Q9BUZ4 470 aaPredicted RBP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SCP2D1Q9UJQ7 156 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PIGBOS1A0A0B4J2F0 54 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 AGPSO00116 658 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 CITO14578 2027 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 FOXN1O15353 648 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 LALBAP00709 142 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 HNRNPLP14866 589 aaKnown RBP eCLIP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 MAP4K2Q12851 820 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ZRANB3Q5FWF4 1079 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 HIST2H2AA3Q6FI13 130 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 DARS2Q6PI48 645 aaKnown RBP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 UTS2BQ765I0 119 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 GALNTL5Q7Z4T8 443 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PHTF2Q8N3S3 785 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 CNTD1Q8N815 330 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 TSEN2Q8NCE0 465 aaKnown RBP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ANKRD60Q9BZ19 345 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 RIMKLBQ9ULI2 386 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PDE10AQ9Y233 779 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ZNF638Q14966 1978 aaKnown RBP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ABCA6Q8N139 1617 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ARHGEF11O15085 1522 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 AIPO00170 330 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SIGLEC6O43699 453 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 NDST3O95803 873 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 CD1EP15812 388 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 HOXC12P31275 282 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 GKP32189 559 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 IL5RAQ01344 420 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 GAD2Q05329 585 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 WSCD2Q2TBF2 565 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 Q3C1V9 767 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SHEQ5VZ18 495 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC22A10Q63ZE4 541 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SCARA5Q6ZMJ2 495 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PROSER1Q86XN7 944 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 TRIM48Q8IWZ4 208 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 ZNF384Q8TF68 577 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 TFB1MQ8WVM0 346 aaKnown RBP5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 SMCO4Q9NRQ5 59 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 RPS6KA6Q9UK32 745 aa5.3□□□□□ -1.56
TNRC6B-202ENST00000335727 PCM1Q15154 2024 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ARPP19P56211 112 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MAD2L1Q13257 205 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 CBFBQ13951 182 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM214AQ32MH5 1076 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ETFRF1Q6IPR1 90 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 DNM1P34Q6PK57 102 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 SLC36A4Q6YBV0 504 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM122BQ7Z309 247 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM83CQ9BQN1 747 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 BCL2L14Q9BZR8 327 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MRPS30Q9NP92 439 aaKnown RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 GHRLQ9UBU3 117 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MEMO1Q9Y316 297 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 EFCAB6Q5THR3 1501 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ADAMDEC1O15204 470 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 GZMAP12544 262 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ARSEP51690 589 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ACSM2AQ08AH3 577 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 CCBE1Q6UXH8 406 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ENOSF1Q7L5Y1 443 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 PYROXD2Q8N2H3 581 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ATG4AQ8WYN0 398 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 NSMAFQ92636 917 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 TECTBQ96PL2 329 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ZNF559Q9BR84 538 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM50BQ9Y247 325 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 CKMT2P17540 419 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 LEXMQ3ZCV2 418 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 PGBD3Q8N328 593 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 AZIN2Q96A70 460 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 PCED1AQ9H1Q7 454 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 SNX15Q9NRS6 342 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MESDQ14696 234 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ASTE1Q2TB18 679 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FJX1Q86VR8 437 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 CIR1Q86X95 450 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 FAM217AQ8IXS0 508 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ZNF540Q8NDQ6 660 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 TNFAIP8L1Q8WVP5 186 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 RPF2Q9H7B2 306 aaKnown RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MSI1O43347 362 aaKnown RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 IFNA2P01563 188 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 CHRM5P08912 532 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ATXN8OSP0DMR3 200 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 EPCAMP16422 314 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 TCN1P20061 433 aaPredicted RBP5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 ACSBG2Q5FVE4 666 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 LPCAT4Q643R3 524 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 LYSMD3Q7Z3D4 306 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 AQP12AQ8IXF9 295 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 DDIASQ8IXT1 998 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 MIER2Q8N344 545 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 TRAM1L1Q8N609 369 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 TLR10Q9BXR5 811 aa5.29□□□□□ -1.56
TNRC6B-202ENST00000335727 PPLO60437 1756 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms