RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GTF2H3Q13889 308 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 PLK5Q496M5 336 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 ZNF658BQ4V348 819 aaPredicted RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 CRTC3Q6UUV7 619 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 LAYNQ6UX15 382 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 NAPRTQ6XQN6 538 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 TRAPPC5Q8IUR0 188 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 ACMSDQ8TDX5 336 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 SCARF2Q96GP6 870 aaPredicted RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 MIR1-1HGQ9H1L0 117 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 TM9SF3Q9HD45 589 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 SARS2Q9NP81 518 aaKnown RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 MRPL40Q9NQ50 206 aaKnown RBP21.18■□□□□ 0.98
TPM1-204ENST00000334895 AASDHPPTQ9NRN7 309 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 GULP1Q9UBP9 304 aa21.18■□□□□ 0.98
TPM1-204ENST00000334895 SDK1Q7Z5N4 2213 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 HMGB1P1B2RPK0 211 aaPredicted RBP21.17■□□□□ 0.98
TPM1-204ENST00000334895 RACK1P63244 317 aaKnown RBP21.17■□□□□ 0.98
TPM1-204ENST00000334895 PAQR3Q6TCH7 311 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 XKR5Q6UX68 686 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 RAPH1Q70E73 1250 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 C11orf74Q86VG3 221 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 ANKRD49Q8WVL7 239 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 ZNF514Q96K75 400 aaPredicted RBP21.17■□□□□ 0.98
TPM1-204ENST00000334895 WDR92Q96MX6 357 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 PANX3Q96QZ0 392 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 VPS11Q9H270 941 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 POPDC3Q9HBV1 291 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 GPAMQ9HCL2 828 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 LATS2Q9NRM7 1088 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 FAM86C1Q9NVL1 165 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 SENP1Q9P0U3 644 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 GPR34Q9UPC5 381 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 DHRS7Q9Y394 339 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 ACTL7BQ9Y614 415 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 R4GN57 208 aa21.17■□□□□ 0.98
TPM1-204ENST00000334895 GPR89AB7ZAQ6 455 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 QSOX1O00391 747 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 MPOP05164 745 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 GPR89BP0CG08 455 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 THEGLP0DJG4 465 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 ZNF37AP17032 561 aaPredicted RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 ITPKAP23677 461 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 PDAP1Q13442 181 aaKnown RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 ENPP7Q6UWV6 458 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 CDHR3Q6ZTQ4 885 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 CLEC14AQ86T13 490 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 CENPLQ8N0S6 344 aaPredicted RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 PLD6Q8N2A8 252 aaKnown RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 BANPQ8N9N5 519 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 OR56A4Q8NGH8 313 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 OR1E3Q8WZA6 343 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 PDXPQ96GD0 296 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 LINC00615Q96LM1 132 aaPredicted RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 TM7SF3Q9NS93 570 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 SPATS2LQ9NUQ6 558 aaKnown RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 FAM53CQ9NYF3 392 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 TRMT6Q9UJA5 497 aaKnown RBP21.16■□□□□ 0.98
TPM1-204ENST00000334895 DMDP11532 3685 aa21.16■□□□□ 0.98
TPM1-204ENST00000334895 GRID2O43424 1007 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 FTH1P02794 183 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 AOAHP28039 575 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 CD38P28907 300 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 THOP1P52888 689 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 DLG1Q12959 904 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 HSP90B2PQ58FF3 399 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 WDR45BQ5MNZ6 344 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 RGL4Q8IZJ4 473 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 MFSD2AQ8NA29 543 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ATOH1Q92858 354 aaPredicted RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 UBXN10Q96LJ8 280 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 CCM2Q9BSQ5 444 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 CAAP1Q9H8G2 361 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SUFUQ9UMX1 484 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ACOT9Q9Y305 439 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 PRSS38A1L453 326 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SPAG7O75391 227 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 POP7O75817 140 aaKnown RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 TSPAN12O95859 305 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 KELP23276 732 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 HTR1BP28222 390 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 CNR2P34972 360 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SKIV2L2P42285 1042 aaKnown RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 DHPSP49366 369 aaPredicted RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 GPS2Q13227 327 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 PLA2G4EQ3MJ16 856 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 PYCR3Q53H96 274 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 TAF1BQ53T94 588 aaPredicted RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 LYSMD4Q5XG99 296 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 LRRTM4Q86VH4 590 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 CPNE9Q8IYJ1 553 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SPATA6LQ8N4H0 392 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ZBTB2Q8N680 514 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 LILRA3Q8N6C8 439 aaPredicted RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 FAM174AQ8TBP5 190 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 INPP5DQ92835 1189 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 KLHDC7BQ96G42 594 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 ZC3H10Q96K80 434 aaKnown RBP21.15■□□□□ 0.98
TPM1-204ENST00000334895 SMC6Q96SB8 1091 aa21.15■□□□□ 0.98
TPM1-204ENST00000334895 SLC13A1Q9BZW2 595 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms