RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 MYL4P12829 197 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CYP4B1P13584 511 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 POLR2EP19388 210 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SEC13P55735 322 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SESN3P58005 492 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SRP54P61011 504 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RPS15P62841 145 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 IGLV3-21P80748 117 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZXDBP98169 803 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FANCCQ00597 558 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ECT2LQ008S8 904 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PTSQ03393 145 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 FUT7Q11130 342 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ENOX2Q16206 610 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SKOR2Q2VWA4 1001 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KRT71Q3SY84 523 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PARP15Q460N3 678 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MIDNQ504T8 468 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 LY6G5CQ5SRR4 150 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TPRG1LQ5T0D9 272 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 AGAP7PQ5VUJ5 663 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MBLAC2Q68D91 279 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 HIST2H2BCQ6DN03 193 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 HIST2H2BDQ6DRA6 164 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 STXBP4Q6ZWJ1 553 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 OVCH1Q7RTY7 1134 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ASPGQ86U10 573 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CPXCR1Q8N123 301 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KRI1Q8N9T8 703 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF540Q8NDQ6 660 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PANK1Q8TE04 598 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 CENPIQ92674 756 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PTERQ96BW5 349 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM41AQ96HV5 264 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SERAC1Q96JX3 654 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ZMAT2Q96NC0 199 aaKnown RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 WDFY2Q96P53 400 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 AGAP4Q96P64 663 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PLEKHG4BQ96PX9 1271 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PIGSQ96S52 555 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RAB34Q9BZG1 259 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PLA2G12AQ9BZM1 189 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SLC13A1Q9BZW2 595 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 OR2B2Q9GZK3 357 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 MVB12BQ9H7P6 319 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PDE11AQ9HCR9 933 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RIC8BQ9NVN3 520 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 TAS2R14Q9NYV8 317 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 BCCIPQ9P287 314 aaKnown RBP eCLIP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 IL36AQ9UHA7 158 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 ASIC3Q9UHC3 531 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 SERTAD1Q9UHV2 236 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 PADI1Q9ULC6 663 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 KLF13Q9Y2Y9 288 aaPredicted RBP1.51□□□□□ -2.17
LINC00643-201ENST00000334389 LIPGQ9Y5X9 500 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 RPS6KL1Q9Y6S9 549 aa1.51□□□□□ -2.17
LINC00643-201ENST00000334389 DNAH11Q96DT5 4516 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 IGLV3-16A0A075B6K0 115 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 NEDD8-MDP1E9PL57 170 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 F5H0A9 414 aaPredicted RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 APOL1O14791 398 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 PRKAB2O43741 272 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 DAB1O75553 588 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 NDST3O95803 873 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 AGTP01019 485 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 RPLP0P05388 317 aaKnown RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 AMD1P17707 334 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 GM2AP17900 193 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 HDCP19113 662 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 CD58P19256 250 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 CA4P22748 312 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 HTR1BP28222 390 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 CCR1P32246 355 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 GPC1P35052 558 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ETV5P41161 510 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 SERPINH1P50454 418 aaKnown RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 CLCN3P51790 818 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 VAMP7P51809 220 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ATP2C1P98194 919 aaPredicted RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF763Q0D2J5 394 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 RALGDSQ12967 914 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 NECTIN1Q15223 517 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF239Q16600 458 aaKnown RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ALG11Q2TAA5 492 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 DNTTIP2Q5QJE6 756 aaKnown RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 TMTC4Q5T4D3 741 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM215Q68D42 235 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 ALKBH2Q6NS38 261 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 HMBOX1Q6NT76 420 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 TTC23LQ6PF05 361 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 PAQR9Q6ZVX9 377 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 SPATA2LQ8IUW3 424 aaPredicted RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 SAMD14Q8IZD0 417 aaPredicted RBP1.5□□□□□ -2.17
LINC00643-201ENST00000334389 PPP1R13LQ8WUF5 828 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 EXTL1Q92935 676 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 LRRC58Q96CX6 371 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 C10orf90Q96M02 699 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 GBP5Q96PP8 586 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 SYT15Q9BQS2 421 aa1.5□□□□□ -2.17
LINC00643-201ENST00000334389 CHCHD6Q9BRQ6 235 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms