RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 ANKMY1Q9P2S6 941 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 MSI1O43347 362 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 MGEA5O60502 916 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 MAFKO60675 156 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 VPS4BO75351 444 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TULP3O75386 442 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 S1PR4O95977 384 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CD1DP15813 335 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TGM1P22735 817 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 FSHRP23945 695 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CTGFP29279 349 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ADRA1AP35348 466 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CD86P42081 329 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 GP2P55259 537 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 LCP2Q13094 533 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ANKS6Q68DC2 871 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 SPATA19Q7Z5L4 167 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 C11orf74Q86VG3 221 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 PLD3Q8IV08 490 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 HID1Q8IV36 788 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 Q8N9G6 341 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CNGB3Q9NQW8 809 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 EEDO75530 441 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ILF2Q12905 390 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 PRKG2Q13237 762 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 RBM23Q86U06 439 aaKnown RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 AKAP14Q86UN6 197 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 CNIH3Q8TBE1 160 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 NCLNQ969V3 563 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 EFHD2Q96C19 240 aaPredicted RBP13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TBATAQ96M53 351 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 HBEGFQ99075 208 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 TBCDQ9BTW9 1192 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 ASPSCR1Q9BZE9 553 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 AMBRA1Q9C0C7 1298 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 MPP6Q9NZW5 540 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
SYNE3-201ENST00000334258 NRCAMQ92823 1304 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 SCN4AP35499 1836 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MYBPHLA2RUH7 354 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MYADML2A6NDP7 307 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 NOTOA8MTQ0 251 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 UPK1AO00322 258 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 SLC1A7O00341 560 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 TREHO43280 583 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MMP3P08254 477 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 ENO2P09104 434 aaPredicted RBP13.57□□□□□ -0.24
SYNE3-201ENST00000334258 PRDX3P30048 256 aaKnown RBP13.57□□□□□ -0.24
SYNE3-201ENST00000334258 ADAM17P78536 824 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 HTRA3P83110 453 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 ADPRMQ3LIE5 342 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 UGT3A1Q6NUS8 523 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MCOLN3Q8TDD5 553 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 ITCHQ96J02 903 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 SMOQ99835 787 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MAGEE1Q9HCI5 957 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 VTA1Q9NP79 307 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 NDFIP2Q9NV92 336 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 SNPHO15079 494 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 SLC22A1O15245 554 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 CACNG3O60359 315 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 FTH1P02794 183 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 IGFBP6P24592 240 aaPredicted RBP13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MAP2K4P45985 399 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 NCS1P62166 190 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 EMX1Q04741 257 aaPredicted RBP13.57□□□□□ -0.24
SYNE3-201ENST00000334258 EMX2Q04743 252 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 CRHR2Q13324 411 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 PTPRCAPQ14761 206 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 MARCH8Q5T0T0 291 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 ARMC8Q8IUR7 673 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 RIMKLAQ8IXN7 391 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 FAM86B1Q8N7N1 296 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 POC5Q8NA72 575 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 OR13J1Q8NGT2 312 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 GIPC2Q8TF65 315 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 UGT2B28Q9BY64 529 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 RMND5AQ9H871 391 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 AIG1Q9NVV5 245 aa13.57□□□□□ -0.24
SYNE3-201ENST00000334258 LOC100130705A0A1B0GUX0 176 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 AXIN1O15169 862 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 KRT75O95678 551 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 SLC2A3P11169 496 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
SYNE3-201ENST00000334258 SELPLGQ14242 412 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ENPP6Q6UWR7 440 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 RNF19BQ6ZMZ0 732 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 PRR23BQ6ZRT6 265 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 ARHGAP12Q8IWW6 846 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CLIP4Q8N3C7 705 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 FRS2Q8WU20 508 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 TSPEARQ8WU66 669 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 NUDT8Q8WV74 236 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 CGREF1Q99674 301 aa13.56□□□□□ -0.24
SYNE3-201ENST00000334258 KATNBL1Q9H079 304 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms