RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 LDB2O43679 373 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 ECI2O75521 394 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 PRSS56P0CW18 603 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 GGT1P19440 569 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 PRKACGP22612 351 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 RCVRNP35243 200 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 GSSP48637 474 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 PPP2R2BQ00005 443 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 EMX1Q04741 257 aaPredicted RBP14.28□□□□□ -0.12
SNX20-202ENST00000330943 EPS8Q12929 822 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 DGUOKQ16854 277 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 C6orf136Q5SQH8 315 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 MANEALQ5VSG8 457 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 C14orf80Q86SX3 495 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 CNIH3Q8TBE1 160 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 STAG3L4Q8TBR4 150 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 BLOC1S5Q8TDH9 187 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 MYLPFQ96A32 169 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 CGREF1Q99674 301 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 C17orf80Q9BSJ5 609 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 ALOXE3Q9BYJ1 711 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 SPC25Q9HBM1 224 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 DNAJB9Q9UBS3 223 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 KLQ9UEF7 1012 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 LIMD1Q9UGP4 676 aa14.28□□□□□ -0.12
SNX20-202ENST00000330943 BRCA1P38398 1863 aaKnown RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 A0A0G2JLL6 359 aaPredicted RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 LOC100130705A0A1B0GUX0 176 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 GSTA4O15217 222 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 SLC22A1O15245 554 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 CHRNA1P02708 482 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 UROSP10746 265 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 HOXC13P31276 330 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 ARL1P40616 181 aaPredicted RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 LHX1P48742 406 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 DGKQP52824 942 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 SELENBP1Q13228 472 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 TOP3AQ13472 1001 aaPredicted RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 C6orf183Q5T699 404 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 PAQR3Q6TCH7 311 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 PRRT2Q7Z6L0 340 aaPredicted RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 FAM126BQ8IXS8 530 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 RTL3Q8N8U3 475 aaKnown RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 SCAMP5Q8TAC9 235 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 FAR1Q8WVX9 515 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 HBEGFQ99075 208 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 UGT2B28Q9BY64 529 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 SIAEQ9HAT2 523 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 SCHIP1Q9P0W5 487 aaPredicted RBP14.27□□□□□ -0.12
SNX20-202ENST00000330943 ANKMY1Q9P2S6 941 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.12
SNX20-202ENST00000330943 E9PAM4 449 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 CDC7O00311 574 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RHOBTB1O94844 696 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 MMP2P08253 660 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RPS17P08708 135 aaKnown RBP14.27□□□□□ -0.13
SNX20-202ENST00000330943 PIRTP0C851 137 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 SERPINB10P48595 397 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RENBPP51606 427 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 ISL1P61371 349 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 CARTPTQ16568 116 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 AAK1Q2M2I8 961 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 MARC1Q5VT66 337 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 MRNIPQ6NTE8 343 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 CDYL2Q8N8U2 506 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 PJA1Q8NG27 643 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 OR13C4Q8NGS5 318 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 FRS2Q8WU20 508 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RORBQ92753 470 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 KIAA1191Q96A73 305 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RBM4BQ9BQ04 359 aaKnown RBP14.27□□□□□ -0.13
SNX20-202ENST00000330943 HGH1Q9BTY7 390 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 RBM4Q9BWF3 364 aaKnown RBP14.27□□□□□ -0.13
SNX20-202ENST00000330943 NUSAP1Q9BXS6 441 aaKnown RBP14.27□□□□□ -0.13
SNX20-202ENST00000330943 AGO3Q9H9G7 860 aaKnown RBP14.27□□□□□ -0.13
SNX20-202ENST00000330943 ATP11BQ9Y2G3 1177 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 PMF1-BGLAPU3KQ54 211 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 DOCK3Q8IZD9 2030 aa14.27□□□□□ -0.13
SNX20-202ENST00000330943 NPEPPSL1A6NEC2 478 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 PEX11BO96011 259 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 NPPAP01160 153 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 MRPL19P49406 292 aaKnown RBP14.26□□□□□ -0.13
SNX20-202ENST00000330943 IL5RAQ01344 420 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 FPGSQ05932 587 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 DGCR6Q14129 220 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 CCDC81Q6ZN84 652 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 MCOLN3Q8TDD5 553 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 SLC47A1Q96FL8 570 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 ITCHQ96J02 903 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 AARSD1Q9BTE6 412 aaKnown RBP14.26□□□□□ -0.13
SNX20-202ENST00000330943 MROH8Q9H579 483 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 SCUBE2Q9NQ36 999 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 SMPD4Q9NXE4 827 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 GALPQ9UBC7 116 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 MGEA5O60502 916 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 DNAJB5O75953 348 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 OR4F21O95013 312 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 IGLV3-25P01717 112 aa14.26□□□□□ -0.13
SNX20-202ENST00000330943 MMP3P08254 477 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms