RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 LRRN3Q9H3W5 708 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 EPB41L1Q9H4G0 881 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 UCK1Q9HA47 277 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CARS2Q9HA77 564 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 ASCL3Q9NQ33 180 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 FAM153AQ9UHL3 310 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PCDHGA7Q9Y5G6 932 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 RPS6KL1Q9Y6S9 549 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ADAMTS20P59510 1910 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TDRD6O60522 2096 aaKnown RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 KMT2BQ9UMN6 2715 aaPredicted RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 FRYLO94915 3013 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 DNAH14Q0VDD8 3507 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SCN8AQ9UQD0 1980 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KIR2DS5A0A0G2JLQ3 304 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 A0A0G2JNG1 304 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CPED1A4D0V7 1026 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 GOLGA6L6A8MZA4 724 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KIR2DS3K7RE56 304 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 HGSO14964 777 aaPredicted RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 CHUKO15111 745 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 VEGFDO43915 354 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 BRINP1O60477 761 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 DNAJC6O75061 913 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 USP12O75317 370 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ANXA9O76027 345 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CLDN7O95471 211 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PF4P02776 101 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 FGF1P05230 155 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CTPS1P17812 591 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 CD82P27701 267 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 HMGCLP35914 325 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ADCY8P40145 1251 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TNNT3P45378 269 aaPredicted RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 ABCG1P45844 678 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PDX1P52945 283 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 GABREP78334 506 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 B4GALNT1Q00973 533 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 WASHC5Q12768 1159 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SEPT6Q14141 434 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 KIR2DS5Q14953 304 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ITPRIPL1Q6GPH6 555 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 DAAM2Q86T65 1068 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TMEM139Q8IV31 216 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PELI3Q8N2H9 469 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ARL14Q8N4G2 192 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 LRRC57Q8N9N7 239 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 FAM46DQ8NEK8 389 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SH3KBP1Q96B97 665 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 HAUS1Q96CS2 278 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 PRR11Q96HE9 360 aaPredicted RBP6.27□□□□□ -1.41
SMG1-201ENST00000330588 SLC46A1Q96NT5 459 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 FAM83DQ9H4H8 585 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 YY1AP1Q9H869 796 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 TAAR2Q9P1P5 351 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 SUFUQ9UMX1 484 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ZNF711Q9Y462 761 aa6.27□□□□□ -1.41
SMG1-201ENST00000330588 ZNF106Q9H2Y7 1883 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 A0A1W2PQM1 296 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 A8MX80 341 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PLD2O14939 933 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 NVLO15381 856 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 NUAK1O60285 661 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 STK10O94804 968 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 TJP3O95049 919 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 CPNE6O95741 557 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 FUCA1P04066 466 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RBMS1P29558 406 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 GEMP55040 296 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 INHBCP55103 352 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RWDD2BP57060 319 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 CCL7P80098 99 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PDE1BQ01064 536 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PWP1Q13610 501 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 ZNF569Q5MCW4 686 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 BROXQ5VW32 411 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 KCTD16Q68DU8 428 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 KDELC1Q6UW63 502 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 NPNTQ6UXI9 565 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 WASH2PQ6VEQ5 465 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RD3Q7Z3Z2 195 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 GALNT13Q8IUC8 556 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RELL1Q8IUW5 271 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 PHYKPLQ8IUZ5 450 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 CDKL3Q8IVW4 592 aaPredicted RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 SLITRK4Q8IW52 837 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RBM12BQ8IXT5 1001 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 NAGSQ8N159 534 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 SFRP1Q8N474 314 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RNF10Q8N5U6 811 aaKnown RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 BRSK1Q8TDC3 778 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 HTR3CQ8WXA8 447 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 SCAMP4Q969E2 229 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 LRRC45Q96CN5 670 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 WBP1Q96G27 269 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 AGAP3Q96P47 875 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 BAG1Q99933 345 aaPredicted RBP6.26□□□□□ -1.41
SMG1-201ENST00000330588 TIMM29Q9BSF4 260 aa6.26□□□□□ -1.41
SMG1-201ENST00000330588 RIOK2Q9BVS4 552 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms