RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TNPO3Q9Y5L0 923 aaKnown RBP14.37□□□□□ -0.11
TPM3-206ENST00000330188 PRSS21Q9Y6M0 314 aa14.37□□□□□ -0.11
TPM3-206ENST00000330188 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 CCDC154A6NI56 674 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 OR7A17O14581 309 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 ARPC2O15144 300 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 FFAR2O15552 330 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 SYNCRIPO60506 623 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 CLDN7O95471 211 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 BMP2P12643 396 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 POLR2JP52435 117 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 CREB5Q02930 508 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 NFATC2Q13469 925 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 ATP6AP1LQ52LC2 224 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 SLC30A9Q6PML9 568 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 SNX20Q7Z614 316 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 RBFAQ8N0V3 343 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 GALNT15Q8N3T1 639 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 SFRP1Q8N474 314 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 TMEM199Q8N511 208 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 GOLM1Q8NBJ4 401 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 PDPRQ8NCN5 879 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 DNAJB14Q8TBM8 379 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 DDI1Q8WTU0 396 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 EPB41L1Q9H4G0 881 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 IL26Q9NPH9 171 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 MRPL17Q9NRX2 175 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 PLK2Q9NYY3 685 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 GNPTGQ9UJJ9 305 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 LEF1Q9UJU2 399 aaPredicted RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 CLEC4EQ9ULY5 219 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 TRBV5-4A0A0C4DH59 114 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 DHRS12A0PJE2 317 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 AKAP10O43572 662 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 TFAP2AP05549 437 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 CAPN1P07384 714 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 BPIP17213 487 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 PSMC3P17980 439 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 HNF1BP35680 557 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 CSNK1DP48730 415 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 TXNL4AP83876 142 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 CYP4F8P98187 520 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 GTF2H2Q13888 395 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 INPP5AQ14642 412 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 RABL3Q5HYI8 236 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 TBCELQ5QJ74 424 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 GTF2H2CQ6P1K8 395 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 FAM117BQ6P1L5 589 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 SLC39A5Q6ZMH5 540 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 PROKR1Q8TCW9 393 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 NCSTNQ92542 709 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 ACDQ96AP0 544 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 OSBPL11Q9BXB4 747 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 MRPS26Q9BYN8 205 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 HEBP1Q9NRV9 189 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 LSM7Q9UK45 103 aaKnown RBP14.36□□□□□ -0.11
TPM3-206ENST00000330188 OGDHLQ9ULD0 1010 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
TPM3-206ENST00000330188 MYOCOSA0A1B0GUC4 107 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SMIM31A0A1B0GVY4 71 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 FAM234BA2RU67 622 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 RAD51BO15315 384 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZNF821O75541 412 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 GLUD1P00367 558 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 S100BP04271 92 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 SPATA31D3P0C874 917 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 CKMT2P17540 419 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ITGALP20701 1170 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ACRV1P26436 265 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 GSTT1P30711 240 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 GSK3BP49841 420 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TLE2Q04725 743 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 PRKCQQ04759 706 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 LMAN2Q12907 356 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TRIM60Q495X7 471 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TIGD2Q4W5G0 525 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 NAIF1Q69YI7 327 aaPredicted RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 IYDQ6PHW0 289 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 IL27RAQ6UWB1 636 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SPATA31D4Q6ZUB0 917 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 DDX53Q86TM3 631 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 ITIH5Q86UX2 942 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ZFAND4Q86XD8 727 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 METTL6Q8TCB7 284 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 C17orf80Q9BSJ5 609 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 RC3H2Q9HBD1 1191 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 TMEM45AQ9NWC5 275 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 ELOVL2Q9NXB9 296 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SLAMF8Q9P0V8 285 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 PTBP2Q9UKA9 531 aaKnown RBP14.35□□□□□ -0.11
TPM3-206ENST00000330188 RNF11Q9Y3C5 154 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 OARD1Q9Y530 152 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TRIM17Q9Y577 477 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 SOCS2O14508 198 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TEX28O15482 410 aa14.35□□□□□ -0.11
TPM3-206ENST00000330188 TAPBPO15533 448 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms