RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PLA2G15Q8NCC3 412 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 PIWIL2Q8TC59 973 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 DTX3LQ8TDB6 740 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 HEXDCQ8WVB3 486 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 LPGAT1Q92604 370 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 TMEM120AQ9BXJ8 343 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 SLC17A9Q9BYT1 436 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 C6orf106Q9H6K1 298 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 ZNF395Q9H8N7 513 aaPredicted RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 CPSF2Q9P2I0 782 aaKnown RBP18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 XPR1Q9UBH6 696 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 INVSQ9Y283 1065 aa18.53■□□□□ 0.56
EXOSC3-201ENST00000327304 C10orf142B7Z368 130 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 ITM2AO43736 263 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 OR1I1O60431 355 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 RBP1P09455 135 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 ACRV1P26436 265 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 GLRBP48167 497 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 SGCGQ13326 291 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 ACAP2Q15057 778 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 RAET1GQ6H3X3 334 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 GPR174Q9BXC1 333 aa18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 MBNL1Q9NR56 388 aaKnown RBP18.52■□□□□ 0.56
EXOSC3-201ENST00000327304 AXIN1O15169 862 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 RAD51BO15315 384 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 DNAJC6O75061 913 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 NDUFS3O75489 264 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 PCCBP05166 539 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CCDC166P0CW27 439 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CSHL1Q14406 222 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 IRF4Q15306 451 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 TECRLQ5HYJ1 363 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CERS6Q6ZMG9 384 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 TP53I13Q8NBR0 393 aaPredicted RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 BOCQ9BWV1 1114 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 STN1Q9H668 368 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 FZD3Q9NPG1 666 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 PRMT8Q9NR22 394 aaPredicted RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 SMOXQ9NWM0 555 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 UBA6A0AVT1 1052 aaPredicted RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 INPP4BO15327 924 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 SLC31A1O15431 190 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CD9P21926 228 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 SKIV2L2P42285 1042 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 GPR1P46091 355 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 ADARP55265 1226 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 GPRC6AQ5T6X5 926 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 NLRP8Q86W28 1048 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 NAT14Q8WUY8 206 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 ULK4Q96C45 1275 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 ERP27Q96DN0 273 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CCDC126Q96EE4 140 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 SORT1Q99523 831 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 MYOCQ99972 504 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 WWP1Q9H0M0 922 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 MYLK2Q9H1R3 596 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CCDC68Q9H2F9 335 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 KCTD5Q9NXV2 234 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 CNOT6Q9ULM6 557 aaKnown RBP18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 COMMD10Q9Y6G5 202 aa18.51■□□□□ 0.55
EXOSC3-201ENST00000327304 LYPLA1O75608 230 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 KHDC1Q4VXA5 237 aaKnown RBP18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 LYPLAL1Q5VWZ2 237 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 PNCKQ6P2M8 343 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 BTN2A2Q8WVV5 523 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 GLYATL1Q969I3 302 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 VPS35Q96QK1 796 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 GATA5Q9BWX5 397 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 ZDHHC3Q9NYG2 299 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 MBD1Q9UIS9 605 aaPredicted RBP18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 DNAJC16Q9Y2G8 782 aa18.5■□□□□ 0.55
EXOSC3-201ENST00000327304 DLX3O60479 287 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 MTX2O75431 263 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 DNAJC8O75937 253 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 ATP5HO75947 161 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 SNUPNO95149 360 aaKnown RBP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 IGHV4-34P06331 123 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 TDGF1P13385 188 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 ATP5F1P24539 256 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 DNAJB13P59910 316 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 B4GALNT1Q00973 533 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 TIAL1Q01085 375 aaKnown RBP eCLIP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 ZNF648Q5T619 568 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 KIAA0895LQ68EN5 471 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 TMEM207Q6UWW9 146 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 NAPRTQ6XQN6 538 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 TRIM74Q86UV6 250 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 ANKRD49Q8WVL7 239 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 ASB12Q8WXK4 309 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 SKA1Q96BD8 255 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 LENG8Q96PV6 779 aaPredicted RBP18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 DRC3Q9H069 523 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 EBF2Q9HAK2 575 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 SYTL2Q9HCH5 934 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 TAS2R13Q9NYV9 303 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 HEY2Q9UBP5 337 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 EML5Q05BV3 1969 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 LAMTOR5O43504 91 aa18.49■□□□□ 0.55
EXOSC3-201ENST00000327304 LATO43561 262 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms