RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 TYMPP19971 482 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 VARSP26640 1264 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 AKT1P31749 480 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ATP5C1P36542 298 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC26A3P40879 764 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 TTPAP49638 278 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 CCT8P50990 548 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ATP4BP51164 291 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 IL5RAQ01344 420 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ITGADQ13349 1161 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 DDX39BQ13838 428 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 TGFBIQ15582 683 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 LETMD1Q6P1Q0 360 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 CYP20A1Q6UW02 462 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 HACD2Q6Y1H2 254 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 PHACTR4Q8IZ21 702 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 MDGA1Q8NFP4 955 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 OR4F6Q8NGB9 312 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC39A13Q96H72 371 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ADGRE3Q9BY15 652 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 CIPCQ9C0C6 399 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 CRLS1Q9UJA2 301 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 PADI4Q9UM07 663 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 INVSQ9Y283 1065 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ORC6Q9Y5N6 252 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 OTOFQ9HC10 1997 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 BOLA2-SMG1P6H3BVE0 249 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 GJB5O95377 273 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 PENKP01210 267 aaPredicted RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 ERVPABLB-1P60509 514 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 PGS1Q32NB8 556 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 TMEM199Q8N511 208 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 UROC1Q96N76 676 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 LRRC3Q9BY71 257 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 DERL2Q9GZP9 239 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 OLA1Q9NTK5 396 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 PCTPQ9UKL6 214 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 SARDHQ9UL12 918 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 SLC45A1Q9Y2W3 748 aa12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 FCF1Q9Y324 198 aaKnown RBP12.73□□□□□ -0.37
HMGCS1-201ENST00000325110 THRBP10828 461 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 UGT1A1P22309 533 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 UGT1A4P22310 534 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 UGT1A3P35503 534 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 UGT1A5P35504 534 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 CLCN2P51788 898 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 TUBA4AP68366 448 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 TBC1D25Q3MII6 688 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 CD300LGQ6UXG3 332 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 C8orf59Q8N0T1 100 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 SFRP1Q8N474 314 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RHEBL1Q8TAI7 183 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF599Q96NL3 588 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 TSSK3Q96PN8 268 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ASB8Q9H765 288 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 BAG5Q9UL15 447 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 EIF3LQ9Y262 564 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ZNF623O75123 536 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RASAL1O95294 804 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 FGF4P08620 206 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 CCNA2P20248 432 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 MYF6P23409 242 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 IL12AP29459 219 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GKP32189 559 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ALDH3B2P48448 385 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 PYCR3Q53H96 274 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 INTS11Q5TA45 600 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GALNT18Q6P9A2 607 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ANGPTL8Q6UXH0 198 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RNF19BQ6ZMZ0 732 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GPR180Q86V85 440 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 HID1Q8IV36 788 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ZC3H7AQ8IWR0 971 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 DTWD1Q8N5C7 304 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 SGCDQ92629 289 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 CGREF1Q99674 301 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ACTR8Q9H981 624 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RRAGCQ9HB90 399 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 A0A0G2JMZ2 1700 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 LRRC37A2A6NM11 1700 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 H0YJX3 145 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ACSL4O60488 711 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 SPIDRQ14159 915 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RCAN2Q14206 197 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 ATP6AP1Q15904 470 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 MEP1AQ16819 746 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GTDC1Q4AE62 458 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 RFTN2Q52LD8 501 aaPredicted RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 PERM1Q5SV97 790 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 NADSYN1Q6IA69 706 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 FAM120BQ96EK7 910 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GPATCH1Q9BRR8 931 aaKnown RBP12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 GABRQQ9UN88 632 aa12.72□□□□□ -0.37
HMGCS1-201ENST00000325110 TYW5A2RUC4 315 aaKnown RBP12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 G3V2T6 193 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 ARVCFO00192 962 aa12.71□□□□□ -0.37
HMGCS1-201ENST00000325110 BMP10O95393 424 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms