RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 HERVK_113P63132 956 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 GALNT3Q14435 633 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PSMD5Q16401 504 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 TCTN1Q2MV58 587 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 LAIR1Q6GTX8 287 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 GLYATQ6IB77 296 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 RANBP10Q6VN20 620 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 CCDC81Q6ZN84 652 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 DEFB128Q7Z7B8 93 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 SLCO6A1Q86UG4 719 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 NPAS4Q8IUM7 802 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 SLC22A15Q8IZD6 547 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PDPRQ8NCN5 879 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 ZNF420Q8TAQ5 688 aaPredicted RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 HTRA1Q92743 480 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 FKBP10Q96AY3 582 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 ROPN1LQ96C74 230 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 BARD1Q99728 777 aaKnown RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 SMOC2Q9H3U7 446 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PTBP2Q9UKA9 531 aaKnown RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PSME2Q9UL46 239 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 WDR37Q9Y2I8 494 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PMF1-BGLAPU3KQ54 211 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 UBA6A0AVT1 1052 aaPredicted RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 CASTOR2A6NHX0 329 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PAGE1O75459 146 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 CRCPO75575 148 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 ESRRBO95718 433 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 CPNE6O95741 557 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 CD1DP15813 335 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 MTHFRP42898 656 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 GP2P55259 537 aaKnown RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 KCNJ8Q15842 424 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 C16orf59Q7L2K0 433 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 LINC00523Q86TU6 105 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 MINDY1Q8N5J2 469 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 BLOC1S5Q8TDH9 187 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 TNIP3Q96KP6 325 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 IKZF5Q9H5V7 419 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 TMLHEQ9NVH6 421 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 GIN1Q9NXP7 522 aa12.03□□□□□ -0.48
SEC24A-201ENST00000322887 UBQLN1Q9UMX0 589 aaKnown RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 AAR2Q9Y312 384 aaKnown RBP12.03□□□□□ -0.48
SEC24A-201ENST00000322887 PTGESO14684 152 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 ZNF24P17028 368 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 TCEA1P23193 301 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 FMO3P31513 532 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 NR4A2P43354 598 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 TPTEP56180 551 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 NCS1P62166 190 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 YWHAHQ04917 246 aaPredicted RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 CD47Q08722 323 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 TSNQ15631 228 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 SMN1Q16637 294 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 SMYD5Q6GMV2 418 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 AGMOQ6ZNB7 445 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 DCP1BQ8IZD4 617 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 CLIP4Q8N3C7 705 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 AFAP1L2Q8N4X5 818 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 TTC39CQ8N584 583 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 TRUB1Q8WWH5 349 aaKnown RBP12.02□□□□□ -0.48
SEC24A-201ENST00000322887 HERVK_113Q902F9 699 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 UBE2FQ969M7 185 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 MBOAT4Q96T53 435 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 NSMCE4AQ9NXX6 385 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 GPR45Q9Y5Y3 372 aa12.02□□□□□ -0.48
SEC24A-201ENST00000322887 ZNF701M0R085 212 aaPredicted RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 FGBP02675 491 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 BMP4P12644 408 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 GSSP48637 474 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 ACADVLP49748 655 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 SEPHS1P49903 392 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 HTR6P50406 440 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 CLCNKBP51801 687 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 KCNC4Q03721 635 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 ADPRMQ3LIE5 342 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 ARL13BQ3SXY8 428 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 SPESP1Q6UW49 350 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 GALNT10Q86SR1 603 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 SYVN1Q86TM6 617 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 C10orf111Q8N326 155 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 CDYL2Q8N8U2 506 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 FCRL2Q96LA5 508 aaPredicted RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 HOPXQ9BPY8 73 aaPredicted RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 ATP13A3Q9H7F0 1226 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 SDR39U1Q9NRG7 319 aaPredicted RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 MTRRQ9UBK8 725 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 GNPTGQ9UJJ9 305 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 VPS4AQ9UN37 437 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 SCN5AQ14524 2016 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 PDCD11Q14690 1871 aaKnown RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 MKI67P46013 3256 aaKnown RBP12.02□□□□□ -0.49
SEC24A-201ENST00000322887 CCDC154A6NI56 674 aa12.02□□□□□ -0.49
SEC24A-201ENST00000322887 ALPLP05186 524 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms