RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 GPN3Q9UHW5 284 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 HPRP00739 348 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CALCAP01258 141 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CYP3A5P20815 502 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CYP2A7P20853 494 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 YAP1P46937 504 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PGDP52209 483 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PLA2G16P53816 162 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SMCO1Q147U7 214 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJB7Q7Z6W7 309 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 OR5K1Q8NHB7 308 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PCDHAC1Q9H158 963 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PTPRHQ9HD43 1115 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NOCTQ9UK39 431 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FAM25EA8MYX2 175 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 RFXANKO14593 260 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ADRB2P07550 413 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NOMO3P69849 1222 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NIPAL4Q0D2K0 466 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 NPTX1Q15818 432 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 HECTD3Q5T447 861 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 ANKRD26P1Q6NSI1 321 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 TTC29Q8NA56 475 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 TMLHEQ9NVH6 421 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 SLC9A8Q9Y2E8 581 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 HELZP42694 1942 aaKnown RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KPNA6O60684 536 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 LCP2Q13094 533 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KCNJ11Q14654 390 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 KCNA10Q16322 511 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 PLEKHG4Q58EX7 1191 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 MACC1Q6ZN28 852 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CHMP1BQ7LBR1 199 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 CLIP4Q8N3C7 705 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FLAD1Q8NFF5 587 aa6.99□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJA4Q8WW22 397 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FAM126AQ9BYI3 521 aaPredicted RBP6.99□□□□□ -1.29
SMC1A-201ENST00000322213 FPGTO14772 594 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CYBBP04839 570 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CSH1P0DML2 217 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CSH2P0DML3 217 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 MATN1P21941 496 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 AP1S2P56377 157 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SNAPC1Q16533 368 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PPM1JQ5JR12 505 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 Q6ZNX1 250 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PTGR2Q8N8N7 351 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SLC37A3Q8NCC5 494 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 OR13J1Q8NGT2 312 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PANX1Q96RD7 426 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NFKBIZQ9BYH8 718 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 C12orf65Q9H3J6 166 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SPON1Q9HCB6 807 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 AXIN2Q9Y2T1 843 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PITPNM1O00562 1244 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ATP6AP2O75787 350 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 AP2A1O95782 977 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 STAG3L1P0CL83 205 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANXA3P12429 323 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CCR1P32246 355 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 TAF6P49848 677 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SEMA3AQ14563 771 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PON2Q15165 354 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 OCLNQ16625 522 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 IQCCQ4KMZ1 466 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RALGPS2Q86X27 583 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SLC30A8Q8IWU4 369 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CDK20Q8IZL9 346 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 NLNQ9BYT8 704 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SLC39A8Q9C0K1 460 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PIN4Q9Y237 131 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ARFGEF3Q5TH69 2177 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 COL22A1Q8NFW1 1626 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 INMTO95050 263 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 MT-ND1P03886 318 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 HOXD11P31277 338 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RARRES1P49788 294 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PTPN20Q4JDL3 420 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANKFN1Q8N957 763 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 GLB1L3Q8NCI6 653 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 SMARCD1Q96GM5 515 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 FAM124BQ9H5Z6 455 aaPredicted RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 OR10H3O60404 316 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 TPH1P17752 444 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 DNAJA1P31689 397 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 RPL38P63173 70 aaKnown RBP6.98□□□□□ -1.29
SMC1A-201ENST00000322213 LAMTOR4Q0VGL1 99 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 MARC1Q5VT66 337 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 EFCAB12Q6NXP0 572 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 ANGPTL6Q8NI99 470 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 CANT1Q8WVQ1 401 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 EXOC2Q96KP1 924 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 OMDQ99983 421 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 PTGFRNQ9P2B2 879 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 FAM50BQ9Y247 325 aa6.98□□□□□ -1.29
SMC1A-201ENST00000322213 VILLO15195 856 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms