RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CDKN2AIPNLQ96HQ2 116 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 COG8Q96MW5 612 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 TSSK3Q96PN8 268 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 AARSD1Q9BTE6 412 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ASB8Q9H765 288 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 LRTM1Q9HBL6 345 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 SPASTQ9UBP0 616 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 AGO1Q9UL18 857 aaKnown RBP12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 ADAMTSL1Q8N6G6 1762 aa12.61□□□□□ -0.39
DNMT3A-202ENST00000321117 CROCCQ5TZA2 2017 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MGAT4DA6NG13 374 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 FBP2O00757 339 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ANXA5P08758 320 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ENO2P09104 434 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 HOXB6P17509 224 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MEP1AQ16819 746 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MSANTD2Q6P1R3 559 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 BLOC1S3Q6QNY0 202 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SIDT2Q8NBJ9 832 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ITCHQ96J02 903 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 GSTO2Q9H4Y5 243 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 NUDT4Q9NZJ9 180 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 IKZF3Q9UKT9 509 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SAMD4AQ9UPU9 718 aaKnown RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 USP3Q9Y6I4 520 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ARL5CA6NH57 179 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MOXD2PA6NHM9 499 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ENPP3O14638 875 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MAFKO60675 156 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 GSRP00390 522 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 GABRB3P28472 473 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SOAT1P35610 550 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 HSPA7P48741 367 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 DMPKQ09013 629 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 PTPRCAPQ14761 206 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SYTL3Q4VX76 610 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 FAM171A1Q5VUB5 890 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 TMEM199Q8N511 208 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 KBTBD8Q8NFY9 601 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 KIAA1191Q96A73 305 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SEZ6LQ9BYH1 1024 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 CMTM6Q9NX76 183 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 MTRRQ9UBK8 725 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC13A4Q9UKG4 626 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SLX4Q8IY92 1834 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 LRATO95237 230 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 CCDC159P0C7I6 412 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 CDKN2DP55273 166 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 PWP1Q13610 501 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 NCCRP1Q6ZVX7 275 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ISCA2Q86U28 154 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 AKAP14Q86UN6 197 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 OR5K1Q8NHB7 308 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 GRIN3AQ8TCU5 1115 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ZFYVE19Q96K21 471 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 NPLQ9BXD5 320 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 SMURF2Q9HAU4 748 aa12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 ZNF490Q9ULM2 529 aaPredicted RBP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.6□□□□□ -0.39
DNMT3A-202ENST00000321117 GNG14A0A1W2PPG7 69 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 SLC22A1O15245 554 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 PRKD3O94806 890 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 S1PR4O95977 384 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 C1RP00736 705 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 CD1DP15813 335 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 KRT20P35900 424 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 TPTEP56180 551 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 ARMC12Q5T9G4 340 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 KCTD11Q693B1 232 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 CXCL17Q6UXB2 119 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 RANBP10Q6VN20 620 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 TRUB1Q8WWH5 349 aaKnown RBP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 SH3BP4Q9P0V3 963 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 BTBD3Q9Y2F9 522 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 CAB39Q9Y376 341 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 PLOD2O00469 737 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 NTRK1P04629 796 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 CD52P31358 61 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 GTF2H2Q13888 395 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 GTF2H2CQ6P1K8 395 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 AHSA2Q719I0 299 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 UTS2BQ765I0 119 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 C16orf59Q7L2K0 433 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 DET1Q7L5Y6 550 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 AURKBQ96GD4 344 aaPredicted RBP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 PANX1Q96RD7 426 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 C1QTNF1Q9BXJ1 281 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 ABCG8Q9H221 673 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 COX7A2P14406 83 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 ARSAP15289 507 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 ALDH3B2P48448 385 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 DEPDC1Q5TB30 811 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 LARP4Q71RC2 724 aaKnown RBP eCLIP12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 ADGRG5Q8IZF4 528 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 MYDGFQ969H8 173 aa12.59□□□□□ -0.39
DNMT3A-202ENST00000321117 SMOC2Q9H3U7 446 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms