RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 AFTPHQ6ULP2 937 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 ATP6V0D2Q8N8Y2 350 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 OR8J3Q8NGG0 315 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 ZC3H15Q8WU90 426 aaKnown RBP18.88■□□□□ 0.61
RTN4-201ENST00000317610 MBOAT4Q96T53 435 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 NEURL2Q9BR09 285 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 RAD21L1Q9H4I0 556 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 ACTL8Q9H568 366 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 GORASP2Q9H8Y8 452 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 FAM118AQ9NWS6 357 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 USE1Q9NZ43 259 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 SELENONQ9NZV5 590 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 BLOC1S6Q9UL45 172 aa18.88■□□□□ 0.61
RTN4-201ENST00000317610 MAGED1Q9Y5V3 778 aaPredicted RBP18.88■□□□□ 0.61
RTN4-201ENST00000317610 ZNF623O75123 536 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 CD9P21926 228 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 MTHFRP42898 656 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 MTPNP58546 118 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 YBEYP58557 167 aaPredicted RBP18.87■□□□□ 0.61
RTN4-201ENST00000317610 GNA12Q03113 381 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 PWP1Q13610 501 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 CHDHQ8NE62 594 aaPredicted RBP18.87■□□□□ 0.61
RTN4-201ENST00000317610 ITPKCQ96DU7 683 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 BTN2A3PQ96KV6 586 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 BEGAINQ9BUH8 593 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 FLRT1Q9NZU1 646 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 PCDHGA4Q9Y5G9 962 aa18.87■□□□□ 0.61
RTN4-201ENST00000317610 NCF1BA6NI72 391 aaPredicted RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 NCF1CA8MVU1 366 aaPredicted RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 OR4F21O95013 312 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 HTR1AP08908 422 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 NCF1P14598 390 aaPredicted RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 ACVRL1P37023 503 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 PURAQ00577 322 aaKnown RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 TUSC3Q13454 348 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 BFSP2Q13515 415 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ATP1A4Q13733 1029 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 C6orf141Q5SZD1 244 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ZDHHC13Q8IUH4 622 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 SCN4BQ8IWT1 228 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 PPM1MQ96MI6 270 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 OSBPL10Q9BXB5 764 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 AP5M1Q9H0R1 490 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 PDFQ9HBH1 243 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 INIPQ9NRY2 104 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 DOLKQ9UPQ8 538 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 Q9Y3F1 56 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ASB1Q9Y576 335 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 PCDHGA8Q9Y5G5 932 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ANKRD12Q6UB98 2062 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ANKRD28O15084 1053 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 DNAJB5O75953 348 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 CHRNA1P02708 482 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ITGB1P05556 798 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 IL7RP16871 459 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ERVPABLB-1P60509 514 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ZNF235Q14590 738 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 RAP1GAP2Q684P5 730 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 SULT1C3Q6IMI6 304 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 IGFN1Q86VF2 1251 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 SGCDQ92629 289 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 MUL1Q969V5 352 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ZNF583Q96ND8 569 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 UGT2B28Q9BY64 529 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 ADNPQ9H2P0 1102 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 CARS2Q9HA77 564 aaKnown RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 DNAJB9Q9UBS3 223 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 EIF2B4Q9UI10 523 aaKnown RBP18.86■□□□□ 0.61
RTN4-201ENST00000317610 NAALAD2Q9Y3Q0 740 aa18.86■□□□□ 0.61
RTN4-201ENST00000317610 G3V2T6 193 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 NDUFS3O75489 264 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 SERPINF2P08697 491 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 PPP2R2BQ00005 443 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 SLC16A12Q6ZSM3 486 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 CDYL2Q8N8U2 506 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 PDZD8Q8NEN9 1154 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 ABHD11Q8NFV4 315 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 UROC1Q96N76 676 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 ZNF347Q96SE7 839 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 PDE10AQ9Y233 779 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 SPO11Q9Y5K1 396 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 C1orf232A0A0U1RR37 186 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 PCNAP12004 261 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 CDH3P22223 829 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 MAPKAPK2P49137 400 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 CACNB2Q08289 660 aaPredicted RBP18.85■□□□□ 0.61
RTN4-201ENST00000317610 TOP3AQ13472 1001 aaPredicted RBP18.85■□□□□ 0.61
RTN4-201ENST00000317610 AQP6Q13520 282 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 KIAA0040Q15053 153 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 TRIP4Q15650 581 aaPredicted RBP18.85■□□□□ 0.61
RTN4-201ENST00000317610 MORN1Q5T089 497 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 EGFLAMQ63HQ2 1017 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 CYP20A1Q6UW02 462 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
RTN4-201ENST00000317610 ZBTB46Q86UZ6 589 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 SVOPLQ8N434 492 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 AMBRA1Q9C0C7 1298 aa18.85■□□□□ 0.61
RTN4-201ENST00000317610 VPS26AO75436 327 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 KCNH1O95259 989 aa18.84■□□□□ 0.61
RTN4-201ENST00000317610 OR4Q2P0C623 313 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms