RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TBRG4Q969Z0 631 aaKnown RBP eCLIP17■□□□□ 0.31
SCAMP4-201ENST00000316097 LRRC58Q96CX6 371 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 MUS81Q96NY9 551 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 YTHDF1Q9BYJ9 559 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 ALG9Q9H6U8 611 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 TRPM5Q9NZQ8 1165 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 PSME2Q9UL46 239 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 FAM32AQ9Y421 112 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 SEC14L2O76054 403 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 PEX11BO96011 259 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 ALBP02768 609 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 CHRNA4P43681 627 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 KPNA1P52294 538 aaPredicted RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 ADARB1P78563 741 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 RAB33AQ14088 237 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 GRB7Q14451 532 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 IHHQ14623 411 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 TXNDC8Q6A555 127 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 DENND5AQ6IQ26 1287 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 TBPL2Q6SJ96 375 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 BTLAQ7Z6A9 289 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 SLC22A9Q8IVM8 553 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 UMODL1-AS1Q8N2C9 162 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 BHMTQ93088 406 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 CSF3RQ99062 836 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 SEPHS2Q99611 448 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 IL12RB2Q99665 862 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 LHPPQ9H008 270 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 MRM3Q9HC36 420 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 GLOD4Q9HC38 313 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 NT5MQ9NPB1 228 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 IL23AQ9NPF7 189 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 TMEM248Q9NWD8 314 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 SEPT3Q9UH03 358 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 B3GNT3Q9Y2A9 372 aa17■□□□□ 0.31
SCAMP4-201ENST00000316097 AAR2Q9Y312 384 aaKnown RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 ZFP37Q9Y6Q3 630 aaPredicted RBP17■□□□□ 0.31
SCAMP4-201ENST00000316097 NYNRINQ9P2P1 1898 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 IGLV3-10A0A075B6K4 115 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 PSMD3O43242 534 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 SYNCRIPO60506 623 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 E2F6O75461 281 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 LDLRP01130 860 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 LINC00271P0C7V0 271 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 GJA1P17302 382 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 PAMP19021 973 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 IMPDH1P20839 514 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 IDUAP35475 653 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 GSK3BP49841 420 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 ZXDBP98169 803 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 NRG1Q02297 640 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 GALNT1Q10472 559 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 RABL3Q5HYI8 236 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 NEPROQ6NW34 567 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 SFRP1Q8N474 314 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 RAB2BQ8WUD1 216 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 SLX1AQ9BQ83 275 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 HERC2P3Q9BVR0 1158 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 ING2Q9H160 280 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 INTS10Q9NVR2 710 aaKnown RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 ANAPC2Q9UJX6 822 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 DGKBQ9Y6T7 804 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 MYO7AQ13402 2215 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 CHD9Q3L8U1 2897 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 FGBP02675 491 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 NR4A1P22736 598 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 OPRL1P41146 370 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 POLD3Q15054 466 aaPredicted RBP16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 ZNF678Q5SXM1 525 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 BROXQ5VW32 411 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 PDPRQ8NCN5 879 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 NRBF2Q96F24 287 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 SLC30A3Q99726 388 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 ALG2Q9H553 416 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 INSL5Q9Y5Q6 135 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 DNAJC15Q9Y5T4 150 aa16.99■□□□□ 0.31
SCAMP4-201ENST00000316097 TCRBV5S2A0A599 114 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 DRGXA6NNA5 263 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 KPNA4O00629 521 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PPP6CO00743 305 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PIP5K1BO14986 540 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 TGM5O43548 720 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 CNOT3O75175 753 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 STC2O76061 302 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 GSTT2P0CG29 244 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 GSTT2BP0CG30 244 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 CORO1AP31146 461 aaKnown RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 SHMT2P34897 504 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 KCNC1P48547 511 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 RPS6KA2Q15349 733 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 FUT11Q495W5 492 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PYCR3Q53H96 274 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 PERM1Q5SV97 790 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 TPGS2Q68CL5 300 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 XAF1Q6GPH4 301 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 SGCDQ92629 289 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 KCTD14Q9BQ13 255 aaPredicted RBP16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ADNPQ9H2P0 1102 aa16.98■□□□□ 0.31
SCAMP4-201ENST00000316097 ATAD3AQ9NVI7 634 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms