RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 POM121BA6NF01 834 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 OR2AG2A6NM03 316 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 CACNB4O00305 520 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 COPEO14579 308 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 MAP3K13O43283 966 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 DNAJC8O75937 253 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 WISP3O95389 354 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 HOXC4P09017 264 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 BCKDHBP21953 392 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 GMPRP36959 345 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 IRF9Q00978 393 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 TMEM220Q6QAJ8 160 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 LONP2Q86WA8 852 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 SPNS2Q8IVW8 549 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 SIDT2Q8NBJ9 832 aaKnown RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 SELENOSQ9BQE4 189 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 TSSK1BQ9BXA7 367 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 FAM126AQ9BYI3 521 aaPredicted RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 SARS2Q9NP81 518 aaKnown RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 KCNK9Q9NPC2 374 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 MKS1Q9NXB0 559 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 SMG5Q9UPR3 1016 aaKnown RBP15.9■□□□□ 0.14
TUBB3-201ENST00000315491 ANKRD6Q9Y2G4 727 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 ACOT9Q9Y305 439 aa15.9■□□□□ 0.14
TUBB3-201ENST00000315491 GMNCA6NCL1 334 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 H0Y8X5 98 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 TYROBPO43914 113 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 FTH1P02794 183 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 ZNF8P17098 575 aaPredicted RBP15.89■□□□□ 0.13
TUBB3-201ENST00000315491 SKIV2L2P42285 1042 aaKnown RBP15.89■□□□□ 0.13
TUBB3-201ENST00000315491 PRLHRP49683 370 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 CLCN7P51798 805 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 KIAA1024LP59773 190 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 PFN3P60673 137 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 PPP2R2AP63151 447 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 BCL7AQ4VC05 210 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 TMEM207Q6UWW9 146 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 CD200R1Q8TD46 325 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 SLC30A3Q99726 388 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 ORAI3Q9BRQ5 295 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 SYTL2Q9HCH5 934 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 SPATS2LQ9NUQ6 558 aaKnown RBP15.89■□□□□ 0.13
TUBB3-201ENST00000315491 DHRS7Q9Y394 339 aa15.89■□□□□ 0.13
TUBB3-201ENST00000315491 TOR1BO14657 336 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 PRPF4O43172 522 aaKnown RBP eCLIP15.88■□□□□ 0.133e-7■■■□□ 16.7
TUBB3-201ENST00000315491 GLRA3O75311 464 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 ZNF37AP17032 561 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-201ENST00000315491 PAQR3Q6TCH7 311 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 KYAT3Q6YP21 454 aaKnown RBP15.88■□□□□ 0.13
TUBB3-201ENST00000315491 CLEC14AQ86T13 490 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 TBC1D1Q86TI0 1168 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-201ENST00000315491 BEND7Q8N7W2 519 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-201ENST00000315491 INPP5DQ92835 1189 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 ZNF514Q96K75 400 aaPredicted RBP15.88■□□□□ 0.13
TUBB3-201ENST00000315491 BATF3Q9NR55 127 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 LATS2Q9NRM7 1088 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 DCDC2Q9UHG0 476 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 FBXO4Q9UKT5 387 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 BPTFQ12830 3046 aa15.88■□□□□ 0.13
TUBB3-201ENST00000315491 TMEM120BA0PK00 339 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 MEI4A8MW99 385 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 NUAK1O60285 661 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 MGRN1O60291 552 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 MAGEC1O60732 1142 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 LILRB5O75023 590 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 DNAJC6O75061 913 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 TOP3BO95985 862 aaKnown RBP15.87■□□□□ 0.13
TUBB3-201ENST00000315491 COL6A2P12110 1019 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CD27P26842 260 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CRHR1P34998 444 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 SEC24CP53992 1094 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CLNS1AP54105 237 aaKnown RBP15.87■□□□□ 0.13
TUBB3-201ENST00000315491 YPEL5P62699 121 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 NFATC4Q14934 902 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CDHR3Q6ZTQ4 885 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 ABI3BPQ7Z7G0 1075 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 TRAPPC5Q8IUR0 188 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 PLD6Q8N2A8 252 aaKnown RBP15.87■□□□□ 0.13
TUBB3-201ENST00000315491 ZBTB2Q8N680 514 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 KCTD4Q8WVF5 259 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 ANKRD49Q8WVL7 239 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 TSNARE1Q96NA8 513 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 C1QTNF1Q9BXJ1 281 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 KLHL42Q9P2K6 505 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 GPR34Q9UPC5 381 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 DOCK9Q9BZ29 2069 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 PLXND1Q9Y4D7 1925 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 GPR89AB7ZAQ6 455 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 GSTA1P08263 222 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 GPR89BP0CG08 455 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CCDC166P0CW27 439 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 AVPR2P30518 371 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CCR7P32248 378 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 SLC26A3P40879 764 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 RABIFP47224 123 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 INSCQ1MX18 579 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 CRTC3Q6UUV7 619 aa15.87■□□□□ 0.13
TUBB3-201ENST00000315491 OTOAQ7RTW8 1153 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms