RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CELF5Q8N6W0 485 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 CLHC1Q8NHS4 586 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 HIST1H2ACQ93077 130 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 LENG9Q96B70 501 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 IGSF21Q96ID5 467 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SPATA5L1Q9BVQ7 753 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RSPH9Q9H1X1 276 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 LRRC72A6NJI9 287 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RFXANKO14593 260 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 LRATO95237 230 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 KELP23276 732 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 HTR1BP28222 390 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ACADLP28330 430 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ARF3P61204 181 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 MRPS5P82675 430 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 ARF1P84077 181 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 OCLNQ16625 522 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ERI1Q8IV48 349 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 ZNF615Q8N8J6 731 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 TNFAIP8L1Q8WVP5 186 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SPOCK2Q92563 424 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ACAT2Q9BWD1 397 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CHMP1AQ9HD42 196 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 PDLIM7Q9NR12 457 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 POLR3HQ9Y535 204 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 NUP188Q5SRE5 1749 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 OR6C70A6NIJ9 312 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 EPHB6O15197 1021 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CPNE3O75131 537 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 ULK1O75385 1050 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 GJB5O95377 273 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 APOC1P02654 83 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ANXA5P08758 320 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 NR2F1P10589 423 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PSKH1P11801 424 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ITIH1P19827 911 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RABGGTBP53611 331 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 IRF8Q02556 426 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 LRRC26Q2I0M4 334 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 EOGTQ5NDL2 527 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.11□□□□□ -1.11
VPS41-202ENST00000310301 RALGPS2Q86X27 583 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 PHC2Q8IXK0 858 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CLYBLQ8N0X4 340 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 EPS8L1Q8TE68 723 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RAB2BQ8WUD1 216 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PTCD2Q8WV60 388 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 OR8D1Q8WZ84 308 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 POP5Q969H6 163 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 SLC6A15Q9H2J7 730 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SAMD4AQ9UPU9 718 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 KCNU1A8MYU2 1149 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 E5RJQ4 531 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 CCNB1P14635 433 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 MNDAP41218 407 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ELP6Q0PNE2 266 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 TARBP2Q15633 366 aaKnown RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 C15orf59Q2T9L4 293 aaPredicted RBP8.11□□□□□ -1.11
VPS41-202ENST00000310301 TPGS1Q6ZTW0 290 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 RTL10Q7L3V2 364 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 GPR180Q86V85 440 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 LGI2Q8N0V4 545 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PGAM4Q8N0Y7 254 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 WFIKKN2Q8TEU8 576 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 HSPBAP1Q96EW2 488 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ABCG4Q9H172 646 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 EHD1Q9H4M9 534 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 ATP13A1Q9HD20 1204 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 PLLPQ9Y342 182 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 SNED1Q8TER0 1413 aa8.11□□□□□ -1.11
VPS41-202ENST00000310301 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 FOXO6A8MYZ6 492 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 I3L521 148 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 KPNA3O00505 521 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A9O60656 530 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 GABBR2O75899 941 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CCNYL3P0C7X3 344 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ALPPL2P10696 532 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A6P19224 532 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A1P22309 533 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A4P22310 534 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 S100A2P29034 98 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 GDI1P31150 447 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A3P35503 534 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A5P35504 534 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CBFBQ13951 182 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 HERC3Q15034 1050 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TIGD2Q4W5G0 525 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 TCEAL5Q5H9L2 206 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 HMBOX1Q6NT76 420 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 SH3RF1Q7Z6J0 888 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 ATL1Q8WXF7 558 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 FCRL4Q96PJ5 515 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A7Q9HAW7 530 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A10Q9HAW8 530 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 UGT1A8Q9HAW9 530 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 CFAP97Q9P2B7 532 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 STOX2Q9P2F5 926 aaPredicted RBP8.1□□□□□ -1.11
VPS41-202ENST00000310301 PDE10AQ9Y233 779 aa8.1□□□□□ -1.11
VPS41-202ENST00000310301 A8MX80 341 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms