RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 TJP3O95049 919 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 C9P02748 559 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 ITGB2P05107 769 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 PYGMP11217 842 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 MSH3P20585 1137 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 LPOP22079 712 aaPredicted RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 LEPRP48357 1165 aaKnown RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 SEPHS1P49903 392 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 FOXM1Q08050 763 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 CLCA4Q14CN2 919 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 TAF1AQ15573 450 aaPredicted RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 FNBP1LQ5T0N5 605 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 WASH2PQ6VEQ5 465 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 NLGN4XQ8N0W4 816 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 NLGN4YQ8NFZ3 816 aaPredicted RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 OR4K2Q8NGD2 314 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 ZNF398Q8TD17 642 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 RSC1A1Q92681 617 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 RNF31Q96EP0 1072 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 BAG1Q99933 345 aaPredicted RBP19.16■□□□□ 0.66
LIME1-201ENST00000309546 SLC40A1Q9NP59 571 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 WASH6PQ9NQA3 447 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 FBXO8Q9NRD0 319 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 SMOXQ9NWM0 555 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 FKBPLQ9UIM3 349 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 KCTD3Q9Y597 815 aa19.16■□□□□ 0.66
LIME1-201ENST00000309546 KCNJ13O60928 360 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 ANKRD34CP0C6C1 535 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 CAPZBP47756 277 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 NFE2L1Q14494 772 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 LONRF2Q1L5Z9 754 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 IRGCQ6NXR0 463 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 FAM83HQ6ZRV2 1179 aaPredicted RBP19.15■□□□□ 0.66
LIME1-201ENST00000309546 PEX26Q7Z412 305 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 RBM12BQ8IXT5 1001 aaKnown RBP19.15■□□□□ 0.66
LIME1-201ENST00000309546 BEND7Q8N7W2 519 aaPredicted RBP19.15■□□□□ 0.66
LIME1-201ENST00000309546 EXD3Q8N9H8 876 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 LRRC57Q8N9N7 239 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 GPR150Q8NGU9 434 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 NAT14Q8WUY8 206 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 SPATA13Q96N96 652 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 ZPBPQ9BS86 351 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 ASB8Q9H765 288 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 FAM8A1Q9UBU6 413 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 PILRAQ9UKJ1 303 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 AMFRQ9UKV5 643 aa19.15■□□□□ 0.66
LIME1-201ENST00000309546 PACSIN2Q9UNF0 486 aaPredicted RBP19.15■□□□□ 0.66
LIME1-201ENST00000309546 POLR1CO15160 346 aaPredicted RBP19.14■□□□□ 0.65
LIME1-201ENST00000309546 STK17BO94768 372 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 FAM87AP0C7U9 286 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 ADRA1AP35348 466 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 TMPRSS15P98073 1019 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 DMPKQ09013 629 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 NFATC3Q12968 1075 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 SPARCL1Q14515 664 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 PLCL1Q15111 1095 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 TBR1Q16650 682 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 RANBP10Q6VN20 620 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 FAM92BQ6ZTR7 304 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 UBL4BQ8N7F7 174 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 KIAA1143Q96AT1 154 aaPredicted RBP19.14■□□□□ 0.65
LIME1-201ENST00000309546 TBL1YQ9BQ87 522 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 DESI2Q9BSY9 194 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 GPN2Q9H9Y4 310 aaPredicted RBP19.14■□□□□ 0.65
LIME1-201ENST00000309546 IMP3Q9NV31 184 aaKnown RBP19.14■□□□□ 0.65
LIME1-201ENST00000309546 SIDT1Q9NXL6 827 aaKnown RBP19.14■□□□□ 0.65
LIME1-201ENST00000309546 CRLS1Q9UJA2 301 aa19.14■□□□□ 0.65
LIME1-201ENST00000309546 GCN1Q92616 2671 aaKnown RBP19.13■□□□□ 0.65
LIME1-201ENST00000309546 GOLGA6L9A6NEM1 432 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 C5orf60A6NFR6 353 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 B8ZZF3 427 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 KIF1CO43896 1103 aaKnown RBP19.13■□□□□ 0.65
LIME1-201ENST00000309546 SRP72O76094 671 aaKnown RBP19.13■□□□□ 0.65
LIME1-201ENST00000309546 CRTAMO95727 393 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 SH3BP2P78314 561 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 RPE65Q16518 533 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 CACHD1Q5VU97 1274 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 GAS2L3Q86XJ1 694 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 UNC5BQ8IZJ1 945 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 OR13C4Q8NGS5 318 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 LRRC45Q96CN5 670 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 PPP1R2P1Q96PQ5 205 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 SLC12A9Q9BXP2 914 aa19.13■□□□□ 0.65
LIME1-201ENST00000309546 ZNF768Q9H5H4 540 aaKnown RBP19.13■□□□□ 0.65
LIME1-201ENST00000309546 A0A0U1RQJ8 604 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 LOC101059948A0A1B0GTJ6 334 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 ZIC2O95409 532 aaPredicted RBP19.12■□□□□ 0.65
LIME1-201ENST00000309546 FTCDO95954 541 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 MAP4P27816 1152 aaKnown RBP19.12■□□□□ 0.65
LIME1-201ENST00000309546 KIF5AQ12840 1032 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 DUS1LQ6P1R4 473 aaKnown RBP19.12■□□□□ 0.65
LIME1-201ENST00000309546 ARHGEF18Q6ZSZ5 1173 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 TIPARPQ7Z3E1 657 aaKnown RBP19.12■□□□□ 0.65
LIME1-201ENST00000309546 SYCE1Q8N0S2 351 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 SPC24Q8NBT2 197 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 ZDHHC12Q96GR4 267 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 ELMO2Q96JJ3 720 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 ZNF514Q96K75 400 aaPredicted RBP19.12■□□□□ 0.65
LIME1-201ENST00000309546 OR6C1Q96RD1 312 aa19.12■□□□□ 0.65
LIME1-201ENST00000309546 ULBP3Q9BZM4 244 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms