RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZNF248Q8NDW4 579 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 ING5Q8WYH8 240 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 SCLYQ96I15 445 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 OSBPL2Q9H1P3 480 aa15.78■□□□□ 0.12
USP42-201ENST00000306177 CAPN1P07384 714 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 IL12RB1P42701 662 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 HCAR3P49019 387 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 GRB14Q14449 540 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 TMC5Q6UXY8 1006 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 SAPCD2Q86UD0 394 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 SUSD3Q96L08 255 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 KLHL32Q96NJ5 620 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 ZNF599Q96NL3 588 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 CIB1Q99828 191 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 BCO2Q9BYV7 579 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 ALG2Q9H553 416 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 EIF2B4Q9UI10 523 aaKnown RBP15.77■□□□□ 0.12
USP42-201ENST00000306177 RBM47A0AV96 593 aaKnown RBP15.77■□□□□ 0.12
USP42-201ENST00000306177 NRP1O14786 923 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 TCEA3O75764 348 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 ARHGAP22Q7Z5H3 698 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 PIH1D2Q8WWB5 315 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 NEK6Q9HC98 313 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 ARHGEF3Q9NR81 526 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 GULP1Q9UBP9 304 aa15.77■□□□□ 0.12
USP42-201ENST00000306177 MRTO4Q9UKD2 239 aaKnown RBP15.77■□□□□ 0.12
USP42-201ENST00000306177 PPEF2O14830 753 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 PIP5K1BO14986 540 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 CFHP08603 1231 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 PRPS2P11908 318 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 ERVK-21P61565 698 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 ATXN7L2Q5T6C5 722 aaPredicted RBP15.77■□□□□ 0.11
USP42-201ENST00000306177 RAD51AP1Q96B01 352 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 RPL10LQ96L21 214 aaKnown RBP15.77■□□□□ 0.11
USP42-201ENST00000306177 RBM4BQ9BQ04 359 aaKnown RBP15.77■□□□□ 0.11
USP42-201ENST00000306177 RBM4Q9BWF3 364 aaKnown RBP15.77■□□□□ 0.11
USP42-201ENST00000306177 ASB3Q9Y575 518 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 IRGMA1A4Y4 181 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 CAPN8A6NHC0 703 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 CTSKP43235 329 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.11
USP42-201ENST00000306177 SLC43A3Q8NBI5 491 aa15.77■□□□□ 0.11
USP42-201ENST00000306177 H0YC42 278 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 MGRN1O60291 552 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 FABP3P05413 133 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 MED22Q15528 200 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 KCTD21Q4G0X4 260 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 DCAF12L1Q5VU92 463 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 GPR135Q8IZ08 494 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 LEMD2Q8NC56 503 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 VANGL1Q8TAA9 524 aaPredicted RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 PDP1Q9P0J1 537 aaPredicted RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 SSR3Q9UNL2 185 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 IFNGP01579 166 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 CMPK1P30085 196 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 HOXD13P35453 343 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 KLHL12Q53G59 568 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 PLEKHG4Q58EX7 1191 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 KRT77Q7Z794 578 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 PIK3C3Q8NEB9 887 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 SLC22A17Q8WUG5 538 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 EEF1AKMT1Q8WVE0 214 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 XAGE5Q8WWM1 108 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 EQTNQ9NQ60 294 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 PIGVQ9NUD9 493 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 VIRMAQ69YN4 1812 aaKnown RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 MYH2Q9UKX2 1941 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 H7C0S8 307 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 NELFEP18615 380 aaKnown RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 SLC26A3P40879 764 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 CYP4F8P98187 520 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 PAOXQ6QHF9 649 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 RPRD1BQ9NQG5 326 aaKnown RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 IFT80Q9P2H3 777 aaPredicted RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 ARL5AQ9Y689 179 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 CAPN15O75808 1086 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 GPIP06744 558 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 MYL9P24844 172 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 ZNF792Q3KQV3 632 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 TMEM220Q6QAJ8 160 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 LIX1Q8N485 282 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 S100ZQ8WXG8 99 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 TEPSINQ96N21 525 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 TFB2MQ9H5Q4 396 aaKnown RBP15.76■□□□□ 0.11
USP42-201ENST00000306177 FNIP2Q9P278 1114 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 RAB26Q9ULW5 256 aa15.76■□□□□ 0.11
USP42-201ENST00000306177 SCELO95171 688 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 IGFBP5P24593 272 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 RCVRNP35243 200 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 CHRNA4P43681 627 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 MAPK12P53778 367 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 LDLRAP1Q5SW96 308 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 FAM92BQ6ZTR7 304 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 CXXC5Q7LFL8 322 aaKnown RBP15.75■□□□□ 0.11
USP42-201ENST00000306177 PLEKHO2Q8TD55 490 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 AP3S1Q92572 193 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 ACDQ96AP0 544 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 ABCB8Q9NUT2 735 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 DMTF1Q9Y222 760 aa15.75■□□□□ 0.11
USP42-201ENST00000306177 KIF13AQ9H1H9 1805 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms