RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 ILF2Q12905 390 aaKnown RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 PERM1Q5SV97 790 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 ZNF549Q6P9A3 640 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 PHYKPLQ8IUZ5 450 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 RAVER1Q8IY67 606 aaKnown RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 MIER2Q8N344 545 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 CBR4Q8N4T8 237 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 CDK5RAP1Q96SZ6 601 aaKnown RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 BEGAINQ9BUH8 593 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 TRIM15Q9C019 465 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 MID1IP1Q9NPA3 183 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 PTGDR2Q9Y5Y4 395 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 ACTL7AQ9Y615 435 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 ZFP37Q9Y6Q3 630 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 AQP12BA6NM10 295 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 EIF3FO00303 357 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 COCHO43405 550 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 SNAP91O60641 907 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 SIX3O95343 332 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 ZNF37AP17032 561 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 NEDD8Q15843 81 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 LDLRAP1Q5SW96 308 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 KANK2Q63ZY3 851 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 RAB44Q7Z6P3 723 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 TMCO2Q7Z6W1 182 aaPredicted RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 DENND1CQ8IV53 801 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 AQP12AQ8IXF9 295 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 MINDY1Q8N5J2 469 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 PACRGLQ8N7B6 248 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 TBATAQ96M53 351 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 SEMA3CQ99985 751 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 PTBP2Q9UKA9 531 aaKnown RBP15.97■□□□□ 0.15
LONRF3-201ENST00000304778 CPQQ9Y646 472 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 SLC30A1Q9Y6M5 507 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 ANKRD36A6QL64 1941 aa15.97■□□□□ 0.15
LONRF3-201ENST00000304778 LOC285095A0A1B0GVY8 99 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 FXYD1O00168 92 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 PPP6CO00743 305 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 DLGAP1O14490 977 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 AZIN1O14977 448 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 ANGPT2O15123 496 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 B4GAT1O43505 415 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 HSD17B1P14061 328 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 HMGA1P17096 107 aaKnown RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 SUOXP51687 545 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 ARPC4P59998 168 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 TIAL1Q01085 375 aaKnown RBP eCLIP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 OXA1LQ15070 435 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 SPOUT1Q5T280 376 aaKnown RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 HECTD3Q5T447 861 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 INTS11Q5TA45 600 aaKnown RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 BTLAQ7Z6A9 289 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 RYBPQ8N488 228 aaPredicted RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 CLIP3Q96DZ5 547 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 TDRD1Q9BXT4 1180 aaKnown RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 GKN1Q9NS71 199 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 DHRS12A0PJE2 317 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 UBXN8O00124 270 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 GLP2RO95838 553 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 MLLT10P55197 1068 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 FOXA1P55317 472 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 BNIP2Q12982 314 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 OR4D1Q15615 310 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 C5orf22Q49AR2 442 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 VPS26BQ4G0F5 336 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 TBCELQ5QJ74 424 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 LCN8Q6JVE9 175 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 MFSD2AQ8NA29 543 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 OR7D4Q8NG98 312 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 RHEBL1Q8TAI7 183 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 EFHD2Q96C19 240 aaPredicted RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 CTRCQ99895 268 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 PDFQ9HBH1 243 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 POPDC3Q9HBV1 291 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 AFF4Q9UHB7 1163 aaKnown RBP15.96■□□□□ 0.15
LONRF3-201ENST00000304778 B3GNT3Q9Y2A9 372 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 ST14Q9Y5Y6 855 aa15.96■□□□□ 0.15
LONRF3-201ENST00000304778 NOL3O60936 208 aaKnown RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 PARNO95453 639 aaKnown RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 MATN4O95460 622 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 GOT2P00505 430 aaKnown RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 MTHFD2P13995 350 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 SLC11A2P49281 568 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 RPS24P62847 133 aaKnown RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 GRB7Q14451 532 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 ZNF235Q14590 738 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 INPP5AQ14642 412 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 VASH1Q7L8A9 365 aaPredicted RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 TMCO5AQ8N6Q1 288 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 PDZD8Q8NEN9 1154 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 TNIP2Q8NFZ5 429 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 PEX13Q92968 403 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 VWCEQ96DN2 955 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 ARPC5LQ9BPX5 153 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 POLR1EQ9GZS1 481 aaKnown RBP15.96■□□□□ 0.14
LONRF3-201ENST00000304778 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.14
LONRF3-201ENST00000304778 LRRC14BA6NHZ5 514 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms