RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM126BQ8IXS8 530 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 CLEC4FQ8N1N0 589 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 TDRD1Q9BXT4 1180 aaKnown RBP24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 PAIP1Q9H074 479 aaKnown RBP24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 SMURF2Q9HAU4 748 aa24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 AGO1Q9UL18 857 aaKnown RBP24.08■■□□□ 1.45
SPTSSA-201ENST00000298130 MTMR11A4FU01 709 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 STX7O15400 261 aaKnown RBP24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 DFNA5O60443 496 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 IGLV3-27P01718 113 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 IL7RP16871 459 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 TWF1Q12792 350 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 PRKG2Q13237 762 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 TAF1AQ15573 450 aaPredicted RBP24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 DLEU7Q6UYE1 221 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 TBC1D21Q8IYX1 336 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 OR4F6Q8NGB9 312 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 TMBIM1Q969X1 311 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 ADNPQ9H2P0 1102 aa24.08■■□□□ 1.44
SPTSSA-201ENST00000298130 A8MX80 341 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 VPS4BO75351 444 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 RPL17P18621 184 aaKnown RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 MATN1P21941 496 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 MAPKAPK2P49137 400 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 CRHR2Q13324 411 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 IRF5Q13568 498 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 PRSS55Q6UWB4 352 aaPredicted RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ENPP6Q6UWR7 440 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 NKAPQ8N5F7 415 aaKnown RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 WBP2Q969T9 261 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 PSKH2Q96QS6 385 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 BRINP2Q9C0B6 783 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ZFP14Q9HCL3 533 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 FARSBQ9NSD9 589 aaKnown RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 EXD2Q9NVH0 621 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ADAMTS4O75173 837 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 MLYCDO95822 493 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ALBP02768 609 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ZNF182P17025 639 aaPredicted RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 LPOP22079 712 aaPredicted RBP24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 PSMD7P51665 324 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 EMX2Q04743 252 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 FOXM1Q08050 763 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 AP5B1Q2VPB7 878 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 FRA10AC1Q70Z53 315 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 ALDH16A1Q8IZ83 802 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 CLHC1Q8NHS4 586 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 LRRC3Q9BY71 257 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 HACD3Q9P035 362 aa24.07■■□□□ 1.44
SPTSSA-201ENST00000298130 FAM234BA2RU67 622 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 ALPIP09923 528 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 HOXB8P17481 243 aaPredicted RBP24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 HSPA7P48741 367 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 SEMG2Q02383 582 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 TRAF2Q12933 501 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 CYP20A1Q6UW02 462 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 TAS1R1Q7RTX1 841 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 TMEM173Q86WV6 379 aaPredicted RBP24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 ZFAND4Q86XD8 727 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 HID1Q8IV36 788 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 CLDN19Q8N6F1 224 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 BPIFB6Q8NFQ5 453 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 C17orf80Q9BSJ5 609 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 APOL5Q9BWW9 433 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 HIPK3Q9H422 1215 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 IKZF5Q9H5V7 419 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 NSUN3Q9H649 340 aaKnown RBP24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 FANCEQ9HB96 536 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 VAPAQ9P0L0 249 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 IGHA2P01877 340 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 FCGR1AP12314 374 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 FLT3LGP49771 235 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 NUP107P57740 925 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 HMGCS1Q01581 520 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 RTP2Q5QGT7 225 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 IRAK1BP1Q5VVH5 260 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 BBS5Q8N3I7 341 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 PDZD8Q8NEN9 1154 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 ITFG1Q8TB96 612 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 BOCQ9BWV1 1114 aa24.06■■□□□ 1.44
SPTSSA-201ENST00000298130 KLKB1P03952 638 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 NKG7Q16617 165 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 IMPG1Q17R60 797 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 SOCS4Q8WXH5 440 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 PEX13Q92968 403 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 MTFMTQ96DP5 389 aaKnown RBP24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 RIC8BQ9NVN3 520 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 PCDHGA11Q9Y5H2 935 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 TRIM64CA6NLI5 447 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 ANKRD66B4E2M5 251 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 STX16O14662 325 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 ACSL4O60488 711 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 SLC2A4P14672 509 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 ELNP15502 786 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 EEFSECP57772 596 aaKnown RBP24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 RPL38P63173 70 aaKnown RBP24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 GTDC1Q4AE62 458 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 COQ5Q5HYK3 327 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 GOLGA7Q7Z5G4 137 aa24.05■■□□□ 1.44
SPTSSA-201ENST00000298130 OR10A6Q8NH74 314 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms