RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 LSM12Q3MHD2 195 aaKnown RBP14.07□□□□□ -0.16
C9orf3-202ENST00000297979 GPRC6AQ5T6X5 926 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 CYB5D1Q6P9G0 228 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 TXNDC11Q6PKC3 985 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 ADAMTSL2Q86TH1 951 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 DTX3LQ8TDB6 740 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 PANX3Q96QZ0 392 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 TBC1D10AQ9BXI6 508 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 ABCG8Q9H221 673 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 FIS1Q9Y3D6 152 aa14.07□□□□□ -0.16
C9orf3-202ENST00000297979 RGSL1A5PLK6 1076 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 NCF1BA6NI72 391 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 NCF1CA8MVU1 366 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 SNX2O60749 519 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 LAMP2P13473 410 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 NCF1P14598 390 aaPredicted RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TSPAN8P19075 237 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 ITGB7P26010 798 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 EIF2DP41214 584 aaKnown RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 CDH13P55290 713 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 NAA20P61599 178 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TTLL9Q3SXZ7 439 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 PARM1Q6UWI2 310 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 PIP4K2CQ8TBX8 421 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 SCAMP4Q969E2 229 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 BTBD10Q9BSF8 475 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 NUDT4Q9NZJ9 180 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 CD274Q9NZQ7 290 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TSR3Q9UJK0 312 aaKnown RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TMPRSS11EQ9UL52 423 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 PPM1HQ9ULR3 514 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 STK38LQ9Y2H1 464 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 MYO9BQ13459 2157 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 MAGEC1O60732 1142 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 RPS17P08708 135 aaKnown RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 ELFN1P0C7U0 828 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 HK3P52790 923 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 CRY1Q16526 586 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 HENMT1Q5T8I9 393 aaKnown RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 ANKS6Q68DC2 871 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 FRA10AC1Q70Z53 315 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TRAM1L1Q8N609 369 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 MAELQ96JY0 434 aaKnown RBP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 RIPOR3Q96MK2 946 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 C1QTNF3Q9BXJ4 246 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 LATS2Q9NRM7 1088 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.06□□□□□ -0.16
C9orf3-202ENST00000297979 TRAF6Q9Y4K3 522 aa14.06□□□□□ -0.16
C9orf3-202ENST00000297979 SPECC1L-ADORA2AF8WAN1 911 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 DCXO43602 365 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 TBX10O75333 385 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 SKAP2O75563 359 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 KAT7O95251 611 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 OR56A5P0C7T3 313 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 GDI1P31150 447 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 AKT1P31749 480 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 CPA2P48052 419 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 METAP1P53582 386 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 BTKQ06187 659 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 GRIN2CQ14957 1233 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 TGFBIQ15582 683 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ACSBG2Q5FVE4 666 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 LIPIQ6XZB0 460 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 TECPR1Q7Z6L1 1165 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 SUSD6Q92537 303 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 FGF14Q92915 247 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 UTP4Q969X6 686 aaKnown RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ARRDC3Q96B67 414 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 NSUN5Q96P11 429 aaKnown RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ZSCAN5AQ9BUG6 496 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 KCTD5Q9NXV2 234 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 DENND4AQ7Z401 1863 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 SDHDO14521 159 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 GYG2O15488 501 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 CDK14O94921 469 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 BMP8BP34820 402 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 SH3BP2P78314 561 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 CLCQ05315 142 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 DLX2Q07687 328 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 LCP2Q13094 533 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ZNF284Q2VY69 593 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 NXNQ6DKJ4 435 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 SBSNQ6UWP8 590 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 CHFRQ96EP1 664 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 DCUN1D1Q96GG9 259 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 PPP1R16AQ96I34 528 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 MIPEPQ99797 713 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 RIOK2Q9BVS4 552 aaKnown RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 MEAF6Q9HAF1 191 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 MID1IP1Q9NPA3 183 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 THAP10Q9P2Z0 257 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 PIKFYVEQ9Y2I7 2098 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 PSMD11O00231 422 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ATP1B2P14415 290 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-202ENST00000297979 IL12RB1P42701 662 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 INHBCP55103 352 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 ITPRIPL2Q3MIP1 535 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 FBXL19Q6PCT2 694 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 LONP2Q86WA8 852 aa14.05□□□□□ -0.16
C9orf3-202ENST00000297979 TEX9Q8N6V9 391 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms