RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 IL26Q9NPH9 171 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 KIAA1522Q9P206 1035 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 VPS9D1Q9Y2B5 631 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PLK4O00444 970 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 RNASEH2AO75792 299 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CLIC3O95833 236 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ADH1AP07327 375 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 MTHFD2P13995 350 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 LAG3P18627 525 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CASP9P55211 416 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 SNRPD1P62314 119 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PTGR1Q14914 329 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PDK3Q15120 406 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PHKG1Q16816 387 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 SLC2A7Q6PXP3 512 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TRIM74Q86UV6 250 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 SLC39A11Q8N1S5 342 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TTC30BQ8N4P2 665 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 OR4F6Q8NGB9 312 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 LKAAEAR1Q8TD35 194 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 C2orf15Q8WU43 125 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 FOXJ1Q92949 421 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 COPS8Q99627 209 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 FAM126AQ9BYI3 521 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 SLC25A13Q9UJS0 675 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PSMD13Q9UNM6 376 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 NPIPB15A6NHN6 443 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 FFAR2O15552 330 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 KERAO60938 352 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PENKP01210 267 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 HLA-EP13747 358 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 OGNP20774 298 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 EEF1B2P24534 225 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CA5AP35218 305 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CLCN2P51788 898 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF140P52738 457 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ERVFC1P60507 584 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ATP6V0D1P61421 351 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CACNG1Q06432 222 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TRIM25Q14258 630 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 IRGCQ6NXR0 463 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ZBTB46Q86UZ6 589 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CPSF7Q8N684 471 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 SLC43A3Q8NBI5 491 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 GANCQ8TET4 914 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TEX37Q96LM6 180 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF599Q96NL3 588 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 ACAT2Q9BWD1 397 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 Q9H521 79 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TFB2MQ9H5Q4 396 aaKnown RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PDFQ9HBH1 243 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 RIC8BQ9NVN3 520 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CXXC1Q9P0U4 656 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PNMA8BQ9ULN7 279 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 LCHNA4D1U4 455 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 H3BNC9 293 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 FBP2O00757 339 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SLC22A3O75751 556 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 IGLV3-27P01718 113 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ZDHHC11BP0C7U3 371 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 CAPN3P20807 821 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 IL10P22301 178 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RPL10P27635 214 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 MAPK10P53779 464 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ACOX1Q15067 660 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ARSIQ5FYB1 569 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ACBD5Q5T8D3 534 aaPredicted RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TPGS2Q68CL5 300 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 NCEH1Q6PIU2 408 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 DOK6Q6PKX4 331 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RETREG3Q86VR2 466 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RNF175Q8N4F7 328 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 FBXO30Q8TB52 745 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ELMO1Q92556 727 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 EID2BQ96D98 161 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ZBTB18Q99592 522 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 KCTD14Q9BQ13 255 aaPredicted RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TMEM79Q9BSE2 394 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 COQ10BQ9H8M1 238 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 GID8Q9NWU2 228 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PKD2L2Q9NZM6 624 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 TBC1D30Q9Y2I9 924 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 HCFC2Q9Y5Z7 792 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 AP4B1Q9Y6B7 739 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ANAPC1Q9H1A4 1944 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 G6PDP11413 515 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF23P17027 643 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 BPIP17213 487 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PTGER3P43115 390 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 PSMD8P48556 350 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 RPIAP49247 311 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 WDR5P61964 334 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 YBX1P67809 324 aaKnown RBP9.17□□□□□ -0.94
PRDM9-201ENST00000296682 GTF2H2Q13888 395 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 LRRC26Q2I0M4 334 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ZNF423Q2M1K9 1284 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 ATP13A5Q4VNC0 1218 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 SYTL3Q4VX76 610 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 MPPE1Q53F39 396 aa9.17□□□□□ -0.94
PRDM9-201ENST00000296682 CTSL3PQ5NE16 218 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms