RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ARNTL2Q8WYA1 636 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 EXOSC8Q96B26 276 aaKnown RBP17.05■□□□□ 0.32
CDCP1-201ENST00000296129 OSBPL2Q9H1P3 480 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 CNOT6Q9ULM6 557 aaKnown RBP17.05■□□□□ 0.32
CDCP1-201ENST00000296129 GCNT6Q5T4J0 391 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 FBXL22Q6P050 247 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 MZT2AQ6P582 158 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 DCAKDQ8WVC6 231 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 SCAMP1O15126 338 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 GALNT18Q6P9A2 607 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ADGRG2Q8IZP9 1017 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 FAM47BQ8NA70 645 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 TEFMQ96QE5 360 aaKnown RBP17.05■□□□□ 0.32
CDCP1-201ENST00000296129 OLFM1Q99784 485 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 CRISPLD1Q9H336 500 aa17.05■□□□□ 0.32
CDCP1-201ENST00000296129 ELOVL7A1L3X0 281 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 CAPN8A6NHC0 703 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 STX11O75558 287 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 C8GP07360 202 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 DBTP11182 482 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 KCNE1P15382 129 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 NR1D2Q14995 579 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ALG11Q2TAA5 492 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ERICH5Q6P6B1 374 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 KLHL35Q6PF15 583 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 UNC5BQ8IZJ1 945 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ADCY4Q8NFM4 1077 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 SLCO2A1Q92959 643 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 PLEKHG4BQ96PX9 1271 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 BRINP2Q9C0B6 783 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 LMAN2LQ9H0V9 348 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 NSG1P42857 185 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 SLC10A7Q0GE19 358 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 SLC43A3Q8NBI5 491 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 EXD2Q9NVH0 621 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 PDP1Q9P0J1 537 aaPredicted RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 PTGFRNQ9P2B2 879 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 HS3ST4Q9Y661 456 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 IZUMO1Q8IYV9 350 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ALG2Q9H553 416 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 NOL6Q9H6R4 1146 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 GDAP2Q9NXN4 497 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 MRPS33Q9Y291 106 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 MFHAS1Q9Y4C4 1052 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 CDH5P33151 784 aaPredicted RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ADARP55265 1226 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 KCNJ11Q14654 390 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 KLHL12Q53G59 568 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 CARD16Q5EG05 197 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 SCAIQ8N9R8 606 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ADAMTS15Q8TE58 950 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ZBTB11O95625 1053 aaPredicted RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 FOXN2P32314 431 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 CCR3P51677 355 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
CDCP1-201ENST00000296129 MRPL39Q9NYK5 338 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 RSL24D1Q9UHA3 163 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 ZMYND8Q9ULU4 1186 aaPredicted RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 PPIEQ9UNP9 301 aaKnown RBP17.04■□□□□ 0.32
CDCP1-201ENST00000296129 CXorf49A8MYA2 514 aaPredicted RBP17.03■□□□□ 0.32
CDCP1-201ENST00000296129 FABP3P05413 133 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 CHRNGP07510 517 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 TPP2P29144 1249 aaPredicted RBP17.03■□□□□ 0.32
CDCP1-201ENST00000296129 SIRPB2Q5JXA9 342 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 KLHL17Q6TDP4 642 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 SEC14L3Q9UDX4 400 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 C4BPBP20851 252 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 HCAR3P49019 387 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 ZSWIM7Q19AV6 140 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 UNC93B1Q9H1C4 597 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 MUC13Q9H3R2 512 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 FANCEQ9HB96 536 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 LTBP3Q9NS15 1303 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 J3KR12 359 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 CMPK1P30085 196 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 KCTD21Q4G0X4 260 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 UBXN11Q5T124 520 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 SNX20Q7Z614 316 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 ANKRD46Q86W74 232 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 UBR7Q8N806 425 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 SMYD1Q8NB12 490 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 PIH1D2Q8WWB5 315 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 MCCC1Q96RQ3 725 aaPredicted RBP17.03■□□□□ 0.32
CDCP1-201ENST00000296129 TMEM175Q9BSA9 504 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 ZNF358Q9NW07 568 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 OR1F1O43749 312 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 NBNO60934 754 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 CTU1Q7Z7A3 348 aaKnown RBP17.03■□□□□ 0.32
CDCP1-201ENST00000296129 KBTBD2Q8IY47 623 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 XAGE5Q8WWM1 108 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 LMLNQ96KR4 655 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 GMLQ99445 158 aa17.03■□□□□ 0.32
CDCP1-201ENST00000296129 UGT2B11O75310 529 aa17.02■□□□□ 0.32
CDCP1-201ENST00000296129 TLE2Q04725 743 aa17.02■□□□□ 0.32
CDCP1-201ENST00000296129 SLC9B1Q4ZJI4 515 aa17.02■□□□□ 0.32
CDCP1-201ENST00000296129 C6orf52Q5T4I8 152 aa17.02■□□□□ 0.32
CDCP1-201ENST00000296129 VITQ6UXI7 678 aa17.02■□□□□ 0.32
CDCP1-201ENST00000296129 CHST15Q7LFX5 561 aaPredicted RBP17.02■□□□□ 0.32
CDCP1-201ENST00000296129 MOSPD2Q8NHP6 518 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms