RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 SOD1P00441 154 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 NCF1P14598 390 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 C5AR1P21730 350 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 AOAHP28039 575 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 CORO7P57737 925 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 GALNT1Q10472 559 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 TUBB3Q13509 450 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 AGBL4Q5VU57 503 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 SDE2Q6IQ49 451 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 EPGNQ6UW88 154 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 SBSNQ6UWP8 590 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 CYHR1Q6ZMK1 362 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 ADAMTSL2Q86TH1 951 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 PLCD3Q8N3E9 789 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 IL17RCQ8NAC3 791 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 MAPK15Q8TD08 544 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 DNASE1L2Q92874 299 aa22.51■■□□□ 1.19
PTX3-201ENST00000295927 PRR11Q96HE9 360 aaPredicted RBP22.51■■□□□ 1.19
PTX3-201ENST00000295927 FCHO1O14526 889 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 HDAC3O15379 428 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 GRID2O43424 1007 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 AP2A2O94973 939 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 CBSLP0DN79 551 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 CBSP35520 551 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 COPAP53621 1224 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 TAS2R38P59533 333 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 RPS14P62263 151 aaKnown RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 SKIV2LQ15477 1246 aaKnown RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 TGFBIQ15582 683 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 SH2D4BQ5SQS7 431 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 IER5LQ5T953 404 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 ZNF776Q68DI1 518 aaPredicted RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 HDDC3Q8N4P3 179 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 OR2T3Q8NH03 318 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 KCNV2Q8TDN2 545 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 NMUR2Q9GZQ4 415 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 ACTR5Q9H9F9 607 aaPredicted RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 UTP6Q9NYH9 597 aaKnown RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 CD274Q9NZQ7 290 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 CNOT6Q9ULM6 557 aaKnown RBP22.5■■□□□ 1.19
PTX3-201ENST00000295927 TMCO1Q9UM00 188 aa22.5■■□□□ 1.19
PTX3-201ENST00000295927 K7ESM1 405 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 DIAPH2O60879 1101 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 TSPAN8P19075 237 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 EEF1DP29692 281 aaKnown RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 CDH13P55290 713 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 DPTQ07507 201 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 SEL1L3Q68CR1 1132 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 FRA10AC1Q70Z53 315 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 CUZD1Q86UP6 607 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 PHF7Q9BWX1 381 aaPredicted RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 VTI1BQ9UEU0 232 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 SERGEFQ9UGK8 458 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 APOBEC2Q9Y235 224 aaKnown RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 TMEM233B4DJY2 109 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 SLCO1B7G3V0H7 640 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 STX16-NPEPL1H3BU86 382 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 UBFD1O14562 309 aaKnown RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 STX16O14662 325 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 AP1G1O43747 822 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 SNX2O60749 519 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 ADAM23O75077 832 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 KLF8O95600 359 aaPredicted RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 ASGR2P07307 311 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 DRD1P21728 446 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 ALDH18A1P54886 795 aaKnown RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 GRSF1Q12849 480 aaKnown RBP eCLIP22.49■■□□□ 1.19
PTX3-201ENST00000295927 SLC9B1Q4ZJI4 515 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 FBXO48Q5FWF7 155 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 SPDYAQ5MJ70 313 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 RAET1GQ6H3X3 334 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 PHYKPLQ8IUZ5 450 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 FAM126AQ9BYI3 521 aaPredicted RBP22.49■■□□□ 1.19
PTX3-201ENST00000295927 TNFRSF12AQ9NP84 129 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 NUDT4Q9NZJ9 180 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 ADAMTS6Q9UKP5 1117 aa22.49■■□□□ 1.19
PTX3-201ENST00000295927 A0A1W2PP55 124 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 OR2AG2A6NM03 316 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 GPR1P46091 355 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 AGTR2P50052 363 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 TMEM115Q12893 351 aaPredicted RBP22.48■■□□□ 1.19
PTX3-201ENST00000295927 GBX1Q14549 363 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 STARD3Q14849 445 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 PPP1R3AQ16821 1122 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 BEND7Q8N7W2 519 aaPredicted RBP22.48■■□□□ 1.19
PTX3-201ENST00000295927 RASGEF1AQ8N9B8 481 aa22.48■■□□□ 1.19
PTX3-201ENST00000295927 NSUN5Q96P11 429 aaKnown RBP22.48■■□□□ 1.19
PTX3-201ENST00000295927 MKRN2Q9H000 416 aaKnown RBP22.48■■□□□ 1.19
PTX3-201ENST00000295927 TSPAN6O43657 245 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 CCDC22O60826 627 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 HOXB2P14652 356 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 CTSCP53634 463 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 HSPA14Q0VDF9 509 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 NLRP8Q86W28 1048 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 TRPM6Q9BX84 2022 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 A0A1W2PQF6 199 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 EIF3FO00303 357 aaPredicted RBP22.47■■□□□ 1.19
PTX3-201ENST00000295927 QSOX1O00391 747 aa22.47■■□□□ 1.19
PTX3-201ENST00000295927 RNASEH2AO75792 299 aaKnown RBP22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms