RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 ULK2Q8IYT8 1036 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZNF563Q8TA94 476 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SNRNP27Q8WVK2 155 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC38A2Q96QD8 506 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 P2RY13Q9BPV8 354 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 MRPS26Q9BYN8 205 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 IGKV6D-21A0A0A0MT36 114 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SUV39H1O43463 412 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 UROSP10746 265 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 MPSTP25325 297 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TPP2P29144 1249 aaPredicted RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZNF33AQ06730 810 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SERINC3Q13530 473 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SUZ12Q15022 739 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 PPM1JQ5JR12 505 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 DENND6AQ8IWF6 608 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TWIST2Q8WVJ9 160 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 AZIN2Q96A70 460 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 CNPPD1Q9BV87 410 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 PRKCGP05129 697 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 BNC1Q01954 994 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TPRG1Q6ZUI0 275 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 S100A13Q99584 98 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 CPED1A4D0V7 1026 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 EDF1O60869 148 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 ADH1BP00325 375 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 HNRNPH1P31943 449 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 GDF10P55107 478 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TRIM16LQ309B1 348 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 CCDC103Q8IW40 242 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 OR13C4Q8NGS5 318 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 CLHC1Q8NHS4 586 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 MRPS30Q9NP92 439 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLCO1B3Q9NPD5 702 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TIMM22Q9Y584 194 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 J3KR12 359 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 METTL18O95568 372 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TAS2R39P59534 338 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 RAB14P61106 215 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 RPL26P61254 145 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 FASTKD3Q14CZ7 662 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 HEPACAMQ14CZ8 416 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 VPS26BQ4G0F5 336 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 ANO7Q6IWH7 933 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 FAM46DQ8NEK8 389 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 PLEKHO2Q8TD55 490 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 RCN3Q96D15 328 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 TMEM248Q9NWD8 314 aa17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 RPL26L1Q9UNX3 145 aaKnown RBP17.5■□□□□ 0.39
CDC42EP3-201ENST00000295324 IDH2P48735 452 aaKnown RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 PITRM1Q5JRX3 1037 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 RHBDL2Q9NX52 303 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZMPSTE24O75844 475 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 NEK5Q6P3R8 708 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 TAS1R3Q7RTX0 852 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 LYSMD3Q7Z3D4 306 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 CDKN2AIPNLQ96HQ2 116 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 TEFMQ96QE5 360 aaKnown RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 EQTNQ9NQ60 294 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 A0A0J9YYE9 177 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 DLGAP3O95886 979 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 CFHP08603 1231 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 ALPIP09923 528 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 NOVP48745 357 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 NR1D2Q14995 579 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZCCHC10Q8TBK6 192 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 HOPXQ9BPY8 73 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 CCDC28BQ9BUN5 200 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 SMG9Q9H0W8 520 aaKnown RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 CDC14AQ9UNH5 594 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 PHF24Q9UPV7 400 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 NRP2O60462 931 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A9O60656 530 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A6P19224 532 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A1P22309 533 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A4P22310 534 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 KCNA5P22460 613 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A3P35503 534 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A5P35504 534 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 GJA5P36382 358 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT2B15P54855 530 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 RING1Q06587 406 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 ZNF155Q12901 538 aaPredicted RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC1A5Q15758 541 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 TTC23Q5W5X9 447 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 TTLQ8NG68 377 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 EXOSC8Q96B26 276 aaKnown RBP17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A7Q9HAW7 530 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A10Q9HAW8 530 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 UGT1A8Q9HAW9 530 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 SIRPGQ9P1W8 387 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 SCN11AQ9UI33 1791 aa17.49■□□□□ 0.39
CDC42EP3-201ENST00000295324 COCHO43405 550 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 MATN4O95460 622 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 CLPTM1O96005 669 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 TFPIP10646 304 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 SLC1A2P43004 574 aa17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 PAFAH1B3Q15102 231 aaKnown RBP17.48■□□□□ 0.39
CDC42EP3-201ENST00000295324 CYP1B1Q16678 543 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms