RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 ASPSCR1Q9BZE9 553 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 L2HGDHQ9H9P8 463 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 LZTFL1Q9NQ48 299 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 POT1Q9NUX5 634 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 OGFRQ9NZT2 677 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 WDR37Q9Y2I8 494 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 AAR2Q9Y312 384 aaKnown RBP10.29□□□□□ -0.76
SNF8-201ENST00000290330 ARL5AQ9Y689 179 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 SLC30A1Q9Y6M5 507 aa10.29□□□□□ -0.76
SNF8-201ENST00000290330 FASNP49327 2511 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 C5orf60A6NFR6 353 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 OR52A4PA6NMU1 304 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 C2orf81A6NN90 581 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 STX7O15400 261 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 CTIFO43310 598 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 KCNJ13O60928 360 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 POP7O75817 140 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 UBXN7O94888 489 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 C9P02748 559 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 VCLP18206 1134 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 LPOP22079 712 aaPredicted RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 PSMB4P28070 264 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 CTSCP53634 463 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 RAB15P59190 212 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 MC2RQ01718 297 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 DMPKQ09013 629 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 MSLNQ13421 630 aaPredicted RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 OLIG2Q13516 323 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 PRPSAP1Q14558 356 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 CLCA4Q14CN2 919 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 TAF1AQ15573 450 aaPredicted RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 LDLRAP1Q5SW96 308 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 DCAF12Q5T6F0 453 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 GPRC6AQ5T6X5 926 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 PEX26Q7Z412 305 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 MTERF4Q7Z6M4 381 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 AMZ2Q86W34 360 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 PLXDC1Q8IUK5 500 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 TRIM48Q8IWZ4 208 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 CCDC110Q8TBZ0 833 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 ZNF398Q8TD17 642 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 SPATA13Q96N96 652 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 TEFMQ96QE5 360 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 SPRY4Q9C004 299 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 ZCCHC2Q9C0B9 1178 aaKnown RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 SEMA4CQ9C0C4 833 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 SLC40A1Q9NP59 571 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 FBXO8Q9NRD0 319 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 SMOXQ9NWM0 555 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 TRIM10Q9UDY6 481 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 KLHL3Q9UH77 587 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 AMFRQ9UKV5 643 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 KCTD3Q9Y597 815 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
SNF8-201ENST00000290330 DNMT3AQ9Y6K1 912 aaPredicted RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 MN1Q10571 1320 aaPredicted RBP10.28□□□□□ -0.76
SNF8-201ENST00000290330 SMG1Q96Q15 3661 aaKnown RBP10.27□□□□□ -0.76
SNF8-201ENST00000290330 MGAQ8IWI9 3026 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 A0A0U1RQJ8 604 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 OR2AG2A6NM03 316 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 SRP72O76094 671 aaKnown RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 URI1O94763 535 aaPredicted RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 STK10O94804 968 aaKnown RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 PRAMEF1O95521 474 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 ANKRD34CP0C6C1 535 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 ATXN8OSP0DMR3 200 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 TYRP1P17643 537 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 AMD1P17707 334 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 ATP1A2P50993 1020 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 GFERP55789 205 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 GPR18Q14330 331 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 LINC00303Q3SY05 128 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 DENND5AQ6IQ26 1287 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 TMEM220Q6QAJ8 160 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 RBM12BQ8IXT5 1001 aaKnown RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 KLHDC8BQ8IXV7 354 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 RNF10Q8N5U6 811 aaKnown RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 IL22RA1Q8N6P7 574 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 MNS1Q8NEH6 495 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 OR4K2Q8NGD2 314 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 CXorf40BQ96DE9 158 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 RTP4Q96DX8 246 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 C9orf72Q96LT7 481 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 ALS2CR12Q96Q35 445 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 NAPGQ99747 312 aaPredicted RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 CTRCQ99895 268 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 ARNT2Q9HBZ2 717 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 APMAPQ9HDC9 416 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 FKBPLQ9UIM3 349 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 PILRAQ9UKJ1 303 aa10.27□□□□□ -0.77
SNF8-201ENST00000290330 PACSIN2Q9UNF0 486 aaPredicted RBP10.27□□□□□ -0.77
SNF8-201ENST00000290330 AGAP14A8MT82 685 aa10.26□□□□□ -0.77
SNF8-201ENST00000290330 MIF4GDA9UHW6 222 aaKnown RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 POLR1CO15160 346 aaPredicted RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 TOX3O15405 576 aaPredicted RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 CAPN5O15484 640 aaPredicted RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 DDX3YO15523 660 aaKnown RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 RAD1O60671 282 aa10.26□□□□□ -0.77
SNF8-201ENST00000290330 ZNF189O75820 626 aaPredicted RBP10.26□□□□□ -0.77
SNF8-201ENST00000290330 CRTAMO95727 393 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms