RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 RASSF1Q9NS23 344 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 ADPRHL2Q9NX46 363 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 ENOPH1Q9UHY7 261 aa11.27□□□□□ -0.61
NPC1L1-201ENST00000289547 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 KCNH1O95259 989 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 VNN1O95497 513 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ANGPTL1O95841 491 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SERPIND1P05546 499 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 LTA4HP09960 611 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 OR56A5P0C7T3 313 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF7P17097 686 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 XRCC1P18887 633 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ADRA1BP35368 520 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 KLHL35Q6PF15 583 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 COLGALT2Q8IYK4 626 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM132CQ8N3T6 1108 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PNPT1Q8TCS8 783 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 KCTD13Q8WZ19 329 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 HLA-CQ95604 372 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CEP295NLQ96MC4 621 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TBL1YQ9BQ87 522 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 EHD1Q9H4M9 534 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 AGO1Q9UL18 857 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SCML2Q9UQR0 700 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 A0A087X1B8 175 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PLIN3O60664 434 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 FTH1P02794 183 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PORP16435 677 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 MMP8P22894 467 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CHI3L1P36222 383 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CAPGP40121 348 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PTPN9P43378 593 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PRKG2Q13237 762 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TUBA3CQ13748 450 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ITPRIPL2Q3MIP1 535 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TIGD2Q4W5G0 525 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PMF1Q6P1K2 205 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 IL27RAQ6UWB1 636 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CLEC20AQ6ZU45 233 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM40Q8WWA1 233 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 KCTD5Q9NXV2 234 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PDE10AQ9Y233 779 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ARAP2Q8WZ64 1704 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 A0A0J9YYE9 177 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 RGS10O43665 173 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 RHOP08100 348 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TCF3P15923 654 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CDH13P55290 713 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SEC13P55735 322 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 MADCAM1Q13477 382 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 LSM12Q3MHD2 195 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ARL13AQ5H913 290 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 FGD3Q5JSP0 725 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF621Q6ZSS3 439 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 KRT74Q7RTS7 529 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC39A11Q8N1S5 342 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ZNF781Q8N8C0 355 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TM6SF2Q9BZW4 377 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 APOBEC3GQ9HC16 384 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CRYL1Q9Y2S2 319 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 MGAT4DA6NG13 374 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PBLDP30039 288 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 OR2B6P58173 313 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 MAD2L1Q13257 205 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 RAB33AQ14088 237 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PRKD1Q15139 912 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP1B1Q16678 543 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SLC39A4Q6P5W5 647 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ERICH5Q6P6B1 374 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CYP4Z1Q86W10 505 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 AADATQ8N5Z0 425 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 RDH11Q8TC12 318 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PLEKHO2Q8TD55 490 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TMEM159Q96B96 161 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 CPXM1Q96SM3 734 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 GPR62Q9BZJ7 368 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 PCDHAC1Q9H158 963 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 MAGEH1Q9H213 219 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TOR4AQ9NXH8 423 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 TLR6Q9Y2C9 796 aa11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SAMHD1Q9Y3Z3 626 aaKnown RBP11.26□□□□□ -0.61
NPC1L1-201ENST00000289547 SH3PXD2BA1X283 911 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 E9PAM4 449 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 QSOX1O00391 747 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 TEX28O15482 410 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 UGT2B4P06133 528 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 GPR1P46091 355 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 RPL26P61254 145 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 HERC3Q15034 1050 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MAPKAPK3Q16644 382 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 FAM124AQ86V42 546 aa11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 MRPL57Q9BQC6 102 aaKnown RBP11.25□□□□□ -0.61
NPC1L1-201ENST00000289547 COPS4Q9BT78 406 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms